Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq712 338 2e-88 >seq712 Length=5080 Score = 338 bits (374), Expect = 2e-88 Identities = 187/187 (100%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 12247 CCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGTAAA 12306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4979 CCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACAGTATGTCGCAGGTAAA 4920 Query 12307 AAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGACCGG 12366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4919 AAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGGCGGCGATGCTGACCGG 4860 Query 12367 CAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAATTCT 12426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4859 CAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCATGATGACAGAAATTCT 4800 Query 12427 GCTTAAG 12433 ||||||| Sbjct 4799 GCTTAAG 4793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150563827102536