Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq135 233 2e-56
seq219 98.7 1e-15
>seq135
Length=88816
Score = 233 bits (258), Expect = 2e-56
Identities = 976/1515 (64%), Gaps = 63/1515 (4%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| || |||| ||||| ||| || | ||||| | ||| ||||||| | |
Sbjct 30394 TACTTCGGCTTCAAGACCCTGGAGC-GATCATATCTCCTGAAGCTTGATGGCAAGATTGT 30336
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
|| |||||| ||||| | ||||| || || | ||||| || || |||||||
Sbjct 30335 TGAGCGGCCACAGCACATGATTATGCGAGTGGCTGTTGGCATTTGGGGAGACAACATTGA 30276
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCA 75322
|||| | ||||||||| || |||||| || | | || | || || | ||
Sbjct 30275 GCGTGTCCTTGAGACATACCACCTCATGTCC--AGCAAATTCTTTACCCATGCGTCCCCC 30218
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
||||||||||| |||||||| || | | ||| | ||| |||||| | | | ||
Sbjct 30217 ACCCTCTTCAACGCTGGTACCCCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTTGACATG 30158
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||| ||| || | |||||||| | ||| | | | ||||| || || |||
Sbjct 30157 AAGGACGACAGCATTGAGGGTATCTACGATACTTTGAAGACATGTGCCATGATTTCCAAG 30098
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCG 75501
|||||| ||||| || | || |||| | | | |||| | ||| ||| |||
Sbjct 30097 ATGGCTGGTGGTATCGGCCTCAACGTCCACCGTATCCGTGCCAC--AGGCTCTTATATCG 30040
Query 75502 GGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560
|| ||||| ||| || | ||||| || || |||||||| || || ||| ||| |
Sbjct 30039 CCGGCACAAACGGTACCTCCAACGGTATCATCCCCATGCTTCGTGTCTTCAACAACACTG 29980
Query 75561 CGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGG 75614
| | || || | || | || ||||| || || | || ||||| | |
Sbjct 29979 CCAGATACGTCGACCAGGGTGGAAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCG 29923
Query 75615 AACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAG 75674
| || ||||| |||||| || | ||||||||||| | || ||||| || | ||||
Sbjct 29922 AGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAG 29863
Query 75675 AGGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733
||| || ||| | || || || | || ||||| || || || |||||||||||
Sbjct 29862 AGG-TCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGC 29804
Query 75734 GTTGAGGAGGG--TGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCC 75790
|| ||| || ||| | ||| || | | || || | || || || || || |
Sbjct 29803 GTCGAGAAGAACTTGG--ATTGGACTTTGATGTGCCCTAATGAATGC-CCTGGCCTTGCT 29747
Query 75791 GAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC 75849
||| || ||| ||||| || || || || || |||||||| ||||||| | |
Sbjct 29746 GACTGCTATGGC-GAGGAATTCGAGGCTCTGTATGAGAAGTATGAGAAGGAGGGACGTGG 29688
Query 75850 ---CAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGG 75905
||| |||| | | ||| | || | | ||| | |||| || | | ||||| |
Sbjct 29687 TCGCAA---GACTATCCGAGCT-CAGAAGCTGTGGTACTCTATCCTGGAGGCCCAGACTG 29632
Query 75906 AGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGA 75965
||||||| | || | ||||| ||||||||| || ||| ||||| ||||| ||||
Sbjct 29631 AGACTGGTAACCCCTTCATGCTCTACAAGGATAGCTGCAACCGCAAGAGCAACCAGAAGA 29572
Query 75966 ATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGG 76025
| ||||||| ||| ||||| || || ||||| || ||| | |||||| | | |
Sbjct 29571 ACCTGGGAACCATCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTCTGCGCCTG 29512
Query 76026 ATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC------AATG 76079
||||| ||||| ||||| ||||| || | || || || | |||| || |
Sbjct 29511 ATGAGGTCGCTGTCTGCAACTTGGCCTCTTTGGCTCTCCCTGCTTTTGTCGACTACAACG 29452
Query 76080 AAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAA 76139
||| || | | ||| | | |||| ||||| ||| | |||||| | ||| | |
Sbjct 29451 AAG-GATGC-----TATGACTTTAAAAAGCTTCACGAAGTTACAAAGGTGGTTGTCCGTA 29398
Query 76140 ATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATA 76199
| || ||||| |||| || || | || || ||| || || || || || |
Sbjct 29397 ACCTCAACCGCATCATCGATGTGAACTACTACCCTGTTCAGGAGGCTCGCAACAGCAACA 29338
Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGC 76258
|| ||| |||| |||||| | ||||| || || || || |||| || || | |||
Sbjct 29337 GCCGTCACCGACCCATTGGTGTTGGTGTCCAGGGACTTGCTGATGCTTTCCTTGCTCTGC 29278
Query 76259 CGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATG 76318
|| | | || || ||| ||||| ||| |||| | |||||||| |||||
Sbjct 29277 GTCTTCCC-TTCGAATCACCCGAAGCTCGTGAGCTGAACAAGCAAATCTTTGAGACCATC 29219
Query 76319 TATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACA 76378
|| || || |||| ||||| | || | || | | ||||| | ||| | ||
Sbjct 29218 TACCATGCTGCCCTTGAGGCCTCTATGGAGATTGCCAAGGTTGAAGGTCCTTATTCGTCA 29159
Query 76379 TTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC 76438
|| |||| || ||||| || |||| | ||||| | ||| |||||||| | |
Sbjct 29158 TTCAAGGGATCACCCGCCTCTGAAGGCATTCTTCAATATGACATGTGGGATGT------C 29105
Query 76439 AAGCTCAACTAC------GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTT 76492
|||| || | || || |||||| |||||||| | || |||||| | ||||||
Sbjct 29104 AAGCCCACCGACCTGTGGGAGTGGGATTCGCTCAAGGAGCAAATTAAGGAGCACGGTCTT 29045
Query 76493 CGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 76552
|| ||||| | | | || || ||||| || ||| ||| | || |||||||||||
Sbjct 29044 CGCAACAGCTTGCTCGTCGCCCCTATGCCCACTGCCAGCACTTCCCAGATCTTGGGTAAC 28985
Query 76553 AATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAG 76612
|| || || ||||| || ||||| | |||||||||| | || | ||| || || |||
Sbjct 28984 AACGAGTGTTTTGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGCGAG 28925
Query 76613 TTTGTCATTGTCAAC 76627
|| ||||||||
Sbjct 28924 TTCCAGGTTGTCAAC 28910
>seq219
Length=54288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 342/524 (65%), Gaps = 15/524 (3%)
Strand=Plus/Minus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
||||| || || || ||||| ||||||| ||| | |||||||||| | || ||||
Sbjct 43279 TGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTGAAC 43220
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || ||| | ||||| |||||||||| |||||||||| || || || |||
Sbjct 43219 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATT 43160
Query 64831 GTTTTTGAGAATATCAATAACAATTTT-GCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| ||||| | | ||| |||| || || ||||| ||| || || |
Sbjct 43159 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGC-GAGGTTCAGATCCCCGAGGCTCGATG 43101
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | || | ||| ||| | | | || ||| ||||| || | |
Sbjct 43100 CTTCTACGGTT-TCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCTCTGCTCA 43042
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-AGTTATTTGAAGCCATCCAAACT 65007
| |||| ||| | ||||| | | | | | | | | || | || || | |||
Sbjct 43041 TCGACACCTACGTCAAGGA-GCACAGCCAGCGCACCTACCTCTTCAACGCTATTGAGACT 42983
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064
| || || ||| |||||||| | ||||| || || ||| | |||| || |||
Sbjct 42982 ATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAGGACAAGAACTCT 42923
Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124
||||| ||| |||| || |||| ||||| ||| ||||||||||||||| |||
Sbjct 42922 ---TCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGA 42866
Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184
| || | | || | ||| | |||||| | ||||||||||| || || ||||||
Sbjct 42865 GCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACCTTCTCC 42806
Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| || || || || || || |||||||| ||| || |||||
Sbjct 42805 AACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGC 42762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596558869204320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |