Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq54 269 3e-67
seq5 176 6e-39
seq38 168 9e-37
seq133 127 3e-24
>seq54
Length=139347
Score = 269 bits (298), Expect = 3e-67
Identities = 556/825 (67%), Gaps = 13/825 (2%)
Strand=Plus/Plus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
||||| ||||| || | ||||| || || |||||||| ||||| || |||||| | ||
Sbjct 63248 GCTCTGCGTCGTCTCCGAACTGCTTGCGAGCGTGCCAAGCGAACCCTTTCTTCTTCTGCC 63307
Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180
|| || ||||||| || || | || || || |||||||||| || | || |||
Sbjct 63308 CAGACCTCCATTGAGATCGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACC 63367
Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240
||||| ||||| || ||| | | ||| | || | || | || || ||
Sbjct 63368 CGTGCCCGTTTCGAGGAGCTTTGCCAGGATCTCTTCCGATCCACCATCCAGCCCGTCGAC 63427
Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300
| || ||| || || ||||| || ||||| |||| |||| || ||||| || ||
Sbjct 63428 CGCGTCCTTGCCGATGCCAAGATCGACAAGTCCCAGGTCCATGAGATCGTCCTCGTCGGT 63487
Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360
||||| |||||||| || || || || | | | || |||||| || ||
Sbjct 63488 GGATCTACCCGTATCCCCCGTATCCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAG 63547
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
||||| | |||||||| ||||| || ||||| || ||||| ||||| |||||||||
Sbjct 63548 CCCAACAAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCT 63607
Query 196421 ATTCTCTCAGGTGTTGACAATAAT--AACGTCCA------AGATCTTCTGCTACTTGATG 196472
|| || || || ||||| | | | ||||| ||||| ||||| || || |
Sbjct 63608 ATCCTGTC---TGGTGACACTTCTTCCAAGTCCACCAATGAGATC--CTGCTTCTCGACG 63662
Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532
| || ||| | || |||||| | || || || ||||| | ||||| || | ||
Sbjct 63663 TCGCTCCCCTGTCTCTGGGTATCGAGACTGCTGGTGGCATGATGACCAAGCTCATCCCCC 63722
Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAAC 196592
| ||||| || || || || |||||| | ||||| || || | || || || || |
Sbjct 63723 GCAACACCACCATCCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCTCTGACAACCAGC 63782
Query 196593 CAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTAC 196652
| ||||| | ||||| || || || || || || || | ||||| ||| | || |
Sbjct 63783 CCGGTGTCCTCATTCAGGTCTACGAGGGTGAGCGTCAGCGCACCAAGGACAACAACCTGC 63842
Query 196653 TTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712
| || | ||||| | || || || || | || || | |||||||| |||||| | |
Sbjct 63843 TCGGCAAGTTCGAGCTCACTGGCATCCCTCCCGCCCCTCGTGGTGTTCCCCAGATTGAGG 63902
Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772
| |||||| | || || || || || | |||||| | |||| || |||| |||
Sbjct 63903 TCACCTTCGACGTTGATGCCAACGGTATCATGAACGTCTCCGCTGTTGAGAAGGGCACTG 63962
Query 196773 GCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTG 196832
|||| || | |||||||| || ||||| |||||||| || || || |||||||| ||||
Sbjct 63963 GCAAGTCCAACAAGATTGTCATCACCAACGACAAGGGCCGCCTGTCCAAGGAGGAGATTG 64022
Query 196833 AACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
| || ||| || ||||| || ||||||| ||| || || ||||
Sbjct 64023 AGCGCATGCTTTCCGATGCTGAGAAGTACAAGGAGGAGGATGAGG 64067
Score = 215 bits (238), Expect = 7e-51
Identities = 494/736 (67%), Gaps = 7/736 (1%)
Strand=Plus/Plus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG-TGTAGA 195363
|||||||| | || ||||| ||||| || || ||| | | | | || || ||| ||
Sbjct 62429 GGTATCGACCTGGGTACTACGTACTCTTGCGTCGGTATCTTCCGTGAGGACCGGTGT-GA 62487
Query 195364 GATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAA 195423
|| || | || ||||| || ||||| || || || |||| ||||||||| || || |
Sbjct 62488 TATCATTGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 62547
Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483
|| ||||| |||| |||||||| || || ||| || |||||||| || || ||
Sbjct 62548 CGAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 62607
Query 195484 CTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATAT 195543
||| ||||| ||||| | |||||||||||||| | || | || || | |||||
Sbjct 62608 CTTCGACGCCAAGCGATTGATTGGTCGCAAGTTCGCCGACGCCGAGGTTCAGGCTGATAT 62667
Query 195544 AAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGA 195603
||| ||| | | | ||| | || | ||| ||||| | | | || ||
Sbjct 62668 GAAGCACTTCCCCT-TCAAGATCGTC--GACAAGGCCTCCAAGCCCGTCGTCGAGGTCGA 62724
Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663
|| | || |||| || || | ||||| || || || || ||| | ||| ||
Sbjct 62725 GTTCAAGGGCGAGACCAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGACCAA 62784
Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723
|||| ||||| || || | | | |||| || || || | || || | |||||
Sbjct 62785 GATGCGTGAGACCGCCGAGGCCTACCTGGGCGGCACCGTCAACAACGCCGTCATCACTGT 62844
Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783
|| || ||||||| || || || ||||| || |||||||| | | ||||| ||
Sbjct 62845 CCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTGCCGG 62904
Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843
||| ||| || | || ||||| || || || || ||||| ||||| || ||||| ||
Sbjct 62905 TCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGTCTTGA 62964
Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903
|||||| || | || || || | ||||| ||||| ||||||||||| || ||
Sbjct 62965 CAAGAAGGTCGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTGGTACTTTCGA 63024
Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963
||| || || || | ||||| | ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 63025 TGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTGACAC 63084
Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCC 196022
||| | |||||||| |||||||| ||||| || || || ||| | ||||||
Sbjct 63085 TCACTTGGGTGGTGAGGATTTCGACAACCGTCTGGTCAACCACTTCGTC-AACGAGTTCA 63143
Query 196023 GTCGAAAGAATAAGAA 196038
|| ||||| |||||
Sbjct 63144 AGCGCAAGAACAAGAA 63159
>seq5
Length=314554
Score = 176 bits (194), Expect = 6e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||||| || || || || |||||||| ||||| ||||| ||
Sbjct 52549 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 52490
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| |||| ||||||| || || ||||| |||||||| || || |||
Sbjct 52489 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 52430
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||| | || || |||||||| ||||| || ||||| || ||||| || ||||||
Sbjct 52429 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 52370
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091
| || ||||||||||| || ||||| || || | || || ||||||||
Sbjct 52369 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGTGC 52320
>seq38
Length=159530
Score = 168 bits (186), Expect = 9e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || ||||| || || || || |||||||||||||| ||||| ||
Sbjct 138495 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 138554
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || | || ||||||| || || ||||| |||||||| || || |||
Sbjct 138555 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 138614
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || | || || || || || ||||| |||||||| || || || | || ||||||
Sbjct 138615 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGGACTCTGTCCGACTACAAC 138674
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || ||| | ||||| | ||||| ||||||
Sbjct 138675 ATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGCCTTCGTGGTGGT 138722
Score = 152 bits (168), Expect = 7e-32
Identities = 173/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || | || || || || ||||| || ||||| ||||
Sbjct 139003 GTGGTATGCAGATCTTCGTCAAGACTTTAACCGGCAAGACAATCACACTGGAGGTGGAGT 139062
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || || || ||||| || ||||| | ||||| || || ||||| || ||||| || |
Sbjct 139063 CATCTGATACCATCGACAATGTCAAATCAAAGATCCAGGACAAGGAGGGTATTCCCCCTG 139122
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || ||||| ||||||||||| ||||| ||||| || |||||||| || |
Sbjct 139123 ACCAGCAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGTACCCTGAGCGACT 139182
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
||||| | || |||||| || || ||| | ||||| | || || |||||
Sbjct 139183 ACAACATCCAGAAGGAGAGCACCCTTCACTTGGTTCTCCGTCTGCGTGGTGG 139234
Score = 150 bits (166), Expect = 2e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933
|| |||||||| || || || || ||||| || ||||| ||||| || || || |||||
Sbjct 138792 GTCAAAACCCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCCGATACCATCGAC 138851
Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993
||| |||| ||||||| || || ||||| || || || || || ||||| || || ||
Sbjct 138852 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATC 138911
Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053
|| |||||||| |||||||| || || || || || | || |||||| | || ||||||
Sbjct 138912 TTCGCTGGTAAGCAGCTTGAGGACGGCCGGACTCTGTCCGACTACAACATCCAGAAGGAG 138971
Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|||||||| ||| | || || | || || ||||||
Sbjct 138972 TCTACTCTCCACTTGGTCCTTCGTCTGCGTGGTGGT 139007
>seq133
Length=89200
Score = 127 bits (140), Expect = 3e-24
Identities = 473/733 (65%), Gaps = 19/733 (3%)
Strand=Plus/Plus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || || || || ||||| ||||||| || | || || ||||| || |||||||||
Sbjct 1044 GCTGTCGTCACCGTCCCTGCCTACTTCAACGACGCTCAGCGTCAGGCTACCAAGGACGCT 1103
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | ||||| | || || ||| | || ||||| || || || || || || |||
Sbjct 1104 GGTCAGATTGCTGACCTCGACGTTCTCCGTATCATCAACGAGCCTACTGCTGCCGCCATT 1163
Query 195830 GCTTATGGTCTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTC 195886
|| || ||||||| | |||| || | || || || |||||| |||||
Sbjct 1164 GCCTACGGTCTGGGCTCCGGCAAGACTGAGAAGGAGCGTAACGTCCTGATCTACGATCTT 1223
Query 195887 GGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAG 195946
||||||||||| || ||||| || || || | || | || ||| | ||| || |||
Sbjct 1224 GGTGGTGGTACTTTCGATGTTTCCCTGCTTAGCATCCAGGGCGGTGTCTTCACTGTCAAG 1283
Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCAT 196006
||||| |||||||| || || | ||||| | || ||||| | | | | | | |
Sbjct 1284 GCTACCGCTGGTGACACCCACTTGGGTGGCCAGGACTTCGACAC-CAACCTGTTGGACCA 1342
Query 196007 TTGTCTG-ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA--ATCCTAGGGCT 196063
|| | | |||||| || ||| ||||| | | | | || | || | |||
Sbjct 1343 CTGCAAGAAGGAGTTCATCCGCAAGTCCAAGAAGG--ACCCCAGCAACGACCCCCGTGCT 1400
Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTC 196121
|| || | || | ||||| ||||| |||||||| || || ||||| | || || |
Sbjct 1401 CTCCGAAGACTCCGCACTGCTTGTGAGCGTGCCAAGCGTACCCTCTC--CAGCGGTGCCC 1458
Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181
| | | |||||||||| || | || || || |||||| | || || ||||
Sbjct 1459 AGGCCACCATTGAGATTGACTCTCTCTTCGAGGGTGAGGACTTCACCATGACCATCACCC 1518
Query 196182 GTGCACGTTTTGAAGAGTTAAACTC---TGATTTGTTTAGGAAGTGTATGGAACCTGTTG 196238
|||| ||||| || ||| | ||| | | || | | | | | || |||||||
Sbjct 1519 GTGCTCGTTTCGAGGAGCTCAACGCCAAGGCCTTCTCTGGCA---CCCTCGAGCCTGTTG 1575
Query 196239 AACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGG 196298
|| || || || || ||||| ||| || || || |||||||| || |
Sbjct 1576 CTCAGGTCCTCAAGGATGCCGGCATGGAGAAGAGCGCCGTCGAGGAGATTGTCCTCGTCG 1635
Query 196299 GAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAG 196358
| || || |||||||| || ||||| || || | || ||| |||||| | ||
Sbjct 1636 GTGGTTCTACCCGTATCCCCAAGATCCAGAAGCTTCTGTCTGAGTTCTTCGACGGCAAGA 1695
Query 196359 ATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTG 196418
| | | || | |||||||| ||||| || || || || ||||| ||||| ||||| |
Sbjct 1696 AGCTCGAGAAGAGCATCAACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAGGCCG 1755
Query 196419 CTATTCTCTCAGG 196431
||| ||||| ||
Sbjct 1756 GTATCCTCTCCGG 1768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657850566700080
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