Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq13 120 3e-22
>seq13
Length=255145
Score = 120 bits (132), Expect = 3e-22
Identities = 221/324 (68%), Gaps = 0/324 (0%)
Strand=Plus/Minus
Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370
||||| || ||||| ||||| | |||| | || | ||||| ||| |||||| ||
Sbjct 161152 GATGACATCGGTCTCAGGGTTCTTGCATTTCTTGCAAAGGACAAATTTGTTGATGAAGCC 161093
Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||| || | ||||| | ||| ||| ||||||| |||||||| ||| | || || |
Sbjct 161092 ATCGAGATGATCCTGCAGCTTGGCGGCATCGTGGGCGCCGTTGATGATCCAACGGTCATC 161033
Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490
||| || | | || || || || |||||| | || |||||||| | |||
Sbjct 161032 CTTGGGGTCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACGTAGGA 160973
Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550
| || || |||| | || |||| || || |||||||| || |||||||| ||
Sbjct 160972 ACCAGGGCGAGCAAGAGACTGAGCGACGCTGGACAAGTTGACGACAACGGTCTTGATACC 160913
Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610
||| ||||| ||||| | ||||| || |||| ||| |||||||||||||| || ||
Sbjct 160912 GTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATCTTGTAGCGGTAGAAGGCATC 160853
Query 34611 CGCCACATTGCGGTTAACGTTCAC 34634
|||| ||| |||||| ||
Sbjct 160852 GCTGACATCGCGACGAACGTTGAC 160829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412834359661427
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |