Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13 120 3e-22 >seq13 Length=255145 Score = 120 bits (132), Expect = 3e-22 Identities = 221/324 (68%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| || ||||| ||||| | |||| | || | ||||| ||| |||||| || Sbjct 161152 GATGACATCGGTCTCAGGGTTCTTGCATTTCTTGCAAAGGACAAATTTGTTGATGAAGCC 161093 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| || | ||||| | ||| ||| ||||||| |||||||| ||| | || || | Sbjct 161092 ATCGAGATGATCCTGCAGCTTGGCGGCATCGTGGGCGCCGTTGATGATCCAACGGTCATC 161033 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 ||| || | | || || || || |||||| | || |||||||| | ||| Sbjct 161032 CTTGGGGTCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACGTAGGA 160973 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || |||| | || |||| || || |||||||| || |||||||| || Sbjct 160972 ACCAGGGCGAGCAAGAGACTGAGCGACGCTGGACAAGTTGACGACAACGGTCTTGATACC 160913 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||| ||||| ||||| | ||||| || |||| ||| |||||||||||||| || || Sbjct 160912 GTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATCTTGTAGCGGTAGAAGGCATC 160853 Query 34611 CGCCACATTGCGGTTAACGTTCAC 34634 |||| ||| |||||| || Sbjct 160852 GCTGACATCGCGACGAACGTTGAC 160829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412834359661427