Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 1e-24
seq38 116 2e-21
seq287 105 4e-18
>seq5
Length=314554
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | ||| ||||||||| ||||| ||||| ||| |||| ||||
Sbjct 52337 CAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 52396
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || |||||||||| ||| |||||||| | || | |||||||||||
Sbjct 52397 CTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 52456
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || |||| ||| || ||
Sbjct 52457 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 52516
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||||||||||||| || || ||||||||
Sbjct 52517 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 52549
>seq38
Length=159530
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| |||| ||||||||| ||||| ||||| || || | || ||||
Sbjct 138706 AGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCT 138647
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| || |||||||| | || | |||||||||||
Sbjct 138646 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 138587
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || | ||| || || | ||| ||
Sbjct 138586 TGGATCTTGGACTTCAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 138531
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGACTA 34989
|||||| || ||||||||||| || ||||| |||||| | | ||| ||
Sbjct 138530 GGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATGGTTGCGGATTA 138483
Score = 109 bits (120), Expect = 4e-19
Identities = 155/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||||||||||||||| ||||| ||||| ||| | || | ||
Sbjct 139219 AGAACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCGTCT 139160
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 139159 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCC 139100
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| |||||| || | ||||| ||| | ||| || || | || ||
Sbjct 139099 TGGATCTTTGATTTGAC--AT--TGTCGATGGTATCAGATGACTCCACCTCCAGTGTGAT 139044
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || | ||||| || |||||||||||
Sbjct 139043 TGTCTTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 139008
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 10/205 (5%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | || ||||||||| ||||| ||||| || || | || | ||
Sbjct 138991 AGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCGTCC 138932
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||| || || |||||||| | || | |||||||||||
Sbjct 138931 TCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 138872
Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || |||||| |||| ||||| | | |||||| |||| || |
Sbjct 138871 TGGATCTTGGACTTGACGTTGTCGATGGTATCGGAT-----GACTCGACCTCAAGAGTGA 138817
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTAC 34965
||||||| || || ||||| || ||
Sbjct 138816 TGGTCTTGCCGGTCAGGGTTTTGAC 138792
>seq287
Length=39990
Score = 105 bits (116), Expect = 4e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| | || |||| || || ||||| || |||||||
Sbjct 4475 CCTTCTGGATGTTGTAGTCAGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 4534
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| ||||| || | || | ||||||||||| | || || |||||
Sbjct 4535 TCAATCGCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 4594
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || || |||||| |||| ||| |||||||| ||||| |||||||| || |
Sbjct 4595 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 4654
Query 34968 A 34968
|
Sbjct 4655 A 4655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325687088060741
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |