Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq12 87.8 7e-12
>seq12
Length=264833
Score = 87.8 bits (96), Expect = 7e-12
Identities = 119/163 (73%), Gaps = 5/163 (3%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | || || ||||||||||| |||||||| | |||||||| | || ||
Sbjct 222102 CTCAATCAAGTGAGCAATTGTCATACGAGACGGAATGGCGTGGGGGTTGATAATGATATC 222161
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802
|| | | || ||| |||||||||||| || || |||| | | | |||||
Sbjct 222162 TGGAGTGAGACCTTCTCTTG---TGAAAGGCATATCCTCCTGTCGGTA-AGTAACACCAA 222217
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
|||| ||||| ||| |||| | |||||||||||||| |||||
Sbjct 222218 TAGTGCCCTTCTGACCGTGACGAGAAGCAAACTTGTCTCCAAT 222260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951938411081992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |