Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 7e-12 >seq12 Length=264833 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| |||||||| | |||||||| | || || Sbjct 222102 CTCAATCAAGTGAGCAATTGTCATACGAGACGGAATGGCGTGGGGGTTGATAATGATATC 222161 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 || | | || ||| |||||||||||| || || |||| | | | ||||| Sbjct 222162 TGGAGTGAGACCTTCTCTTG---TGAAAGGCATATCCTCCTGTCGGTA-AGTAACACCAA 222217 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||| ||| |||| | |||||||||||||| ||||| Sbjct 222218 TAGTGCCCTTCTGACCGTGACGAGAAGCAAACTTGTCTCCAAT 222260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951938411081992