Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq115 105 5e-17
seq14 89.7 4e-12
>seq115
Length=99299
Score = 105 bits (116), Expect = 5e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 131166 AAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTA 131225
|||| ||| |||||||||| || || || ||||||||||||||| ||||||| || || |
Sbjct 63108 AAATCAAAGTTGTAGTAGCAACTATTGCTTTTGGTATGGGTATTGATAAACCAGACGTCA 63049
Query 131226 GAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTA 131285
|| ||||||| || | || ||| |||| | ||||| ||||||||||||| |||
Sbjct 63048 GATTTGTTATGCACCATGGCATTCCGAAGAGCTTAGAAGGCTATTATCAAGAAACTGGCC 62989
Query 131286 GAGCAGGTCGTGATGG 131301
| || || || |||||
Sbjct 62988 GTGCGGGGCGAGATGG 62973
>seq14
Length=252920
Score = 89.7 bits (98), Expect = 4e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| ||||||||||| | |||||||||||||||||| ||||| |||| ||| | || ||
Sbjct 243803 GAGTTTTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTTATTGATACTGCTGTCAAGACA 243862
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
||||| |||||||| || || ||| || ||||| || |||||| | || ||
Sbjct 243863 GCTGAGACTGGTTACATCCAGAGACGTCTCGTCAAAGCTCTGGAAGATCTCAATGCTCAA 243922
Query 435253 TATGATGGTACAGT 435266
|| ||||| || ||
Sbjct 243923 TACGATGGAACCGT 243936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740559751181214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |