Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq38 104 6e-17 >seq38 Length=159530 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| | || ||||| ||| ||||| |||| Sbjct 138509 CAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAA 138568 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || || || ||| || ||| || | | ||||| Sbjct 138569 TGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCTTGATCTT 138628 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | |||||||| ||||| || |||| |||||| ||||||| ||||| Sbjct 138629 CGCCGGCAAGCAGCTCGAAGATGGCCGGACTCTGTCCGACTACAACATCCAGAAGGAGTC 138688 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | ||| | | ||||| Sbjct 138689 CACCCTTCACTTGGTTCTCCGCCTTCG 138715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181799010548319