Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq56 116 4e-21
>seq56
Length=137465
Score = 116 bits (128), Expect = 4e-21
Identities = 190/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290
||||||||| ||||||| ||| |||| | || | ||| || || ||| |||||
Sbjct 86731 CAGCTGGTCGACGCCCTTGCCGGCGTAATCTGCCTTTGCGTCGACATAGTCGGCGCCAAA 86790
Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350
||||| ||||||||||||||| || || || ||||||||| | | ||||| | ||||
Sbjct 86791 GTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTG-AGCC 86849
Query 147351 CG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGG 147409
|| | | | || |||||| ||||||||| | |||||||||| || || | ||
Sbjct 86850 CGACGCTGTCAAGGAACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGC 86909
Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCC 147469
||| | | ||| ||| |||| |||||||||||||||||| | | || | |
Sbjct 86910 TGAGGGCGGTGGAGGAGGTGTTGCCCTCGATGAACCAGAGCAGCTCGGCGATGACGGCGC 86969
Query 147470 TCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500
||||| | ||||||||| || |||||
Sbjct 86970 GGAGGAAGACTCGCTTGGTGGTGAGGAGGGG 87000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583477504509600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |