Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 9e-23
seq38 116 4e-21
seq287 89.7 5e-13
>seq5
Length=314554
Score = 122 bits (134), Expect = 9e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || || || ||||| || ||||||||||||| | |||| |
Sbjct 52332 AGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 52391
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| || || || || ||||| |||||||| || || || ||||| ||
Sbjct 52392 CCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCC 52451
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| || || ||
Sbjct 52452 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 52511
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || | || || |||||||| ||||| |||
Sbjct 52512 ATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 52553
>seq38
Length=159530
Score = 116 bits (128), Expect = 4e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||||| ||||| || |||||||||||| | || | || ||||||||
Sbjct 138698 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCTTCGAGCTG 138639
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || ||||| |||||||| || || || ||||| || || || || || ||
Sbjct 138638 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 138579
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | |||||||| || ||||| ||||| || ||||| || |||||
Sbjct 138578 GGACTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 138519
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| ||||||||
Sbjct 138518 GAGGGTCTTGACGAAGATTTGCAT 138495
Score = 116 bits (128), Expect = 4e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || ||| ||||| || ||||||||||||| | ||| || ||| || |||||
Sbjct 139211 GTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCGTCTTCCAGCTG 139152
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || ||||| || | ||||||||| || || || || || || || || || || ||
Sbjct 139151 CTTACCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT 139092
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
| |||||| ||| | || || || || ||||| || || || || || || |||||
Sbjct 139091 TGATTTGACATTGTCGATGGTATCAGATGACTCCACCTCCAGTGTGATTGTCTTGCCGGT 139032
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
|||||| || ||||| || |||||
Sbjct 139031 TAAAGTCTTGACGAAGATCTGCAT 139008
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || |||||||||||| | || | ||| || |||||
Sbjct 138983 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCGTCCTCAAGCTG 138924
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || || || || | ||||||||| || || || || || || || || || || ||
Sbjct 138923 CTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 138864
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | || ||||| || || || || ||||| ||||| || |||||
Sbjct 138863 GGACTTGACGTTGTCGATGGTATCGGATGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 138804
Query 134690 TAAAGTTTTAACGA 134703
| ||||| ||||
Sbjct 138803 CAGGGTTTTGACGA 138790
>seq287
Length=39990
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||| | ||| | || |||||||| ||||| || || |
Sbjct 4475 CCTTCTGGATGTTGTAGTCAGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 4534
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| ||||||||||| || || || || || || || || || || ||||| ||
Sbjct 4535 TCAATCGCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 4594
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||||| || || || || || || ||||| || || || | || || ||||
Sbjct 4595 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 4654
Query 134704 AAATTT--GCATT 134714
|| ||| |||||
Sbjct 4655 AACTTTTCGCATT 4667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505389309146280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |