Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq135 140 4e-28
>seq135
Length=88816
Score = 140 bits (154), Expect = 4e-28
Identities = 406/615 (66%), Gaps = 14/615 (2%)
Strand=Plus/Plus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || ||||| || | ||| || ||||| ||| ||| |||||||| || || ||
Sbjct 29558 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAA 29617
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| ||||||| ||| |||| | || | ||||| | ||| | | ||| ||
Sbjct 29618 GGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTCTGAGCTCGGAT 29677
Query 69471 TACGGTCTTGTAACG-CTTCTCT--TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCA 69525
|||||| || | || || || ||||| || | || | |||| ||||||||
Sbjct 29678 A---GTCTTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAGAGCC--TCGAATTC- 29731
Query 69526 TCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583
||| ||| | || ||| | | ||||| |||||||| || |||||||| | ||| |
Sbjct 29732 -CTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCATTAGGGCACATCAAAGTCCAATCCA 29790
Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643
| | || || || ||||| || ||||| || ||||| ||||| | || || || |
Sbjct 29791 AGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCAC 29850
Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703
|| | ||||| || || || || || || || ||||| | | ||| |
Sbjct 29851 GGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGG 29910
Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763
||||| || || || || || || | | | || || || || ||||| ||||| || |
Sbjct 29911 CGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTTCCACCCTGGTCGA 29970
Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823
||||||||||||||| || |||| | ||||| || || ||||| || || |||| |
Sbjct 29971 CGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGGAGGTACCGT 30030
Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTC 69883
|||| || | |||||| ||| | || || ||| | || || || || |
Sbjct 30031 TTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGACGTTGAGGCCGATACCAC 30090
Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTAT 69943
| ||||| || || || | ||||| ||||| || || || |||||||| ||||| |
Sbjct 30091 CAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGT 30150
Query 69944 CATCTATCATGTTAA 69958
| || |||||| ||
Sbjct 30151 CGTCCTTCATGTCAA 30165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686896444227960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |