Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq219 134 4e-26 >seq219 Length=54288 Score = 134 bits (148), Expect = 4e-26 Identities = 363/543 (67%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||||||||| |||||||| ||| ||| |||||| | || || Sbjct 43282 TTCTGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTG 43223 Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 | | |||| || || | ||||| | |||| ||||||||||||| | || Sbjct 43222 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGA 43167 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 ||| || ||| ||||| ||||| ||||||| || ||| | | ||||||| Sbjct 43166 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 43107 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 || | |||||||| ||||| | ||||||||||| ||| ||||| ||| || Sbjct 43106 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCTCT 43047 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631 | | ||| | || ||| || || || || ||||| || | ||| || || | Sbjct 43046 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCACCTACCTCTTCAACGCTAT 42990 Query 443632 TGA--CCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689 ||| | | || |||| | ||| | ||||| | ||||| || | || | Sbjct 42989 TGAGACTATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAG-GACA 42931 Query 443690 AAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 | | ||| | || | | |||| || || || ||||||| || || || | || || | Sbjct 42930 AGAACTCTTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCA 42871 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 |||| ||| || ||||||||||||||| | || ||| | || || |||| ||||||||| Sbjct 42870 GCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACC 42812 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868 || ||||| || ||| ||| ||||||||| |||| ||||| || || || ||| Sbjct 42811 TTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGCTTGCCTGCTC 42752 Query 443869 TAC 443871 || Sbjct 42751 CAC 42749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588306715551355