Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq219 134 4e-26
>seq219
Length=54288
Score = 134 bits (148), Expect = 4e-26
Identities = 363/543 (67%), Gaps = 17/543 (3%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| |||||||||||||| |||||||| ||| ||| |||||| | || ||
Sbjct 43282 TTCTGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTG 43223
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| || || | ||||| | |||| ||||||||||||| | ||
Sbjct 43222 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGA 43167
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
||| || ||| ||||| ||||| ||||||| || ||| | | |||||||
Sbjct 43166 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 43107
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|| | |||||||| ||||| | ||||||||||| ||| ||||| ||| ||
Sbjct 43106 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCTCT 43047
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631
| | ||| | || ||| || || || || ||||| || | ||| || || |
Sbjct 43046 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCACCTACCTCTTCAACGCTAT 42990
Query 443632 TGA--CCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGA 443689
||| | | || |||| | ||| | ||||| | ||||| || | || |
Sbjct 42989 TGAGACTATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAG-GACA 42931
Query 443690 AAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748
| | ||| | || | | |||| || || || ||||||| || || || | || || |
Sbjct 42930 AGAACTCTTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCA 42871
Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808
|||| ||| || ||||||||||||||| | || ||| | || || |||| |||||||||
Sbjct 42870 GCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACC 42812
Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868
|| ||||| || ||| ||| ||||||||| |||| ||||| || || || |||
Sbjct 42811 TTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGCTTGCCTGCTC 42752
Query 443869 TAC 443871
||
Sbjct 42751 CAC 42749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588306715551355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |