Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq135 235 7e-57
seq219 104 3e-17
>seq135
Length=88816
Score = 235 bits (260), Expect = 7e-57
Identities = 976/1513 (65%), Gaps = 59/1513 (4%)
Strand=Plus/Plus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
|||||||| ||||| || || ||| | || | |||||||||| | ||||| ||
Sbjct 28910 GTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 28969
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
||||| || || || ||||||||||| || | ||| ||| || ||||| || || |
Sbjct 28970 CTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGAC 29029
Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTC--- 110844
| | ||||| |||||||| | |||||| || | |||||||| |||||| ||
Sbjct 29030 GAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCA 29089
Query 110845 ---GTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901
|| | || ||||| | |||||||||||| | ||||| | |||| || ||
Sbjct 29090 CAGGTCGGTGGGCTTG------ACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGC 29143
Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA-ATTCACAGCTCGCCT 110960
||| || |||| || | ||| | ||||| | | || | | || || ||||
Sbjct 29144 GGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAG-AGGCCT 29202
Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020
| |||| || || || ||||| |||||||| | |||| ||| ||||| ||
Sbjct 29203 CAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTG 29262
Query 111021 AATCAAATGCGTAGCGGCACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
| || || | | || ||| | || || |||| || || || || ||||| | ||||
Sbjct 29263 ATTCGAA-GGGAAGACGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCA 29321
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 111139
|| |||| ||| || | || || || || || ||| || || | || ||
Sbjct 29322 ATGGGTCGGTGACGGCTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCG 29381
Query 111140 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 111199
|||| ||||| || || | ||| | |||||| | ||| ||||| |||| | | |||
Sbjct 29382 ATGATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCA 29441
Query 111200 AAAGTGCGAGTCTCTTCATT------GACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253
| | || |||| || |||| | || || || | || ||||| |||
Sbjct 29442 TA-----GCATC-CTTCGTTGTAGTCGACAAAAGCAGGGAGAGCCAAAGAGGCCAAGTTG 29495
Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313
|| ||||| |||||| | | |||||| | ||| || || || | |||||| ||
Sbjct 29496 CAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCTG 29555
Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373
|| || |||| ||||| ||||| ||||| |||||| ||||||||||||||||
Sbjct 29556 CGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATG 29615
Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGG 111432
|||| | || ||||| ||||| | | || |||| | ||| | | || | ||| |
Sbjct 29616 AAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTCTG-AGCTCG 29674
Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 111492
| | | | | ||||||||| ||| ||||| || || || || || |||||
Sbjct 29675 GATAGTCTTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAGAGCCTCGAATTCCTC 29734
Query 111493 ACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCA 111550
||| || ||| | || || || || || | || || | | || ||| | |||
Sbjct 29735 -GCCATAGCAGTCAGCAAGGCCAGG-GCATTCATTAGGGCACATCAAAGTCCAAT--CCA 29790
Query 111551 CCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
||| ||| || ||||||||||| || || || ||||| || | || || || |
Sbjct 29791 AGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCAC 29850
Query 111609 -TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667
||| || ||||||| | || ||||| || | ||||||||||| | || |||
Sbjct 29851 GGGCACGGA-CCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCG 29909
Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGA 111721
|||||||| ||||| || |||| || | | || ||||| ||| | ||
Sbjct 29910 GCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTTCCACCCTGG 29966
Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781
| || || | || ||| ||| || || |||||||| || || ||||| | || |
Sbjct 29967 TCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGGAGGTA 30026
Query 111782 CCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839
|| ||||| || ||| ||| ||| | |||| | | | |||| || | || |
Sbjct 30027 CCGTTTGTGCCGGCGATATAAGAGCCT--GTGGCACGGATACGGTGGACGTTGAGGCCGA 30084
Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899
|||| |||||| ||| || || ||||| | | | ||| | |||||||| | |
Sbjct 30085 TACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAA 30144
Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959
| ||| ||||| || | | | |||||| ||| | ||| | | || |||||||
Sbjct 30145 TGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGAGCTTGCGGGGTACCAG 30204
Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGT 112017
| ||||||||||| || | || || | || | | || |||||| || ||||||
Sbjct 30205 CGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCT--GGACATGAGGTGGTATGT 30262
Query 112018 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTA 112077
||| | |||| ||||||| || || ||||| | || || ||||| | |||||
Sbjct 30263 CTCAAGGACACGCTCAATGTTGTCTCCCCAAATGCCAACAGCCACTCGCATAATCATGTG 30322
Query 112078 CTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTT 112136
|||||| || | | ||||||| ||| | ||||| | || ||| ||||| |
Sbjct 30323 CTGTGGCCGCTCAACAATCTTGCCATCAAGCTTCAGGAGATATGATC-GCTCCAGGGTCT 30381
Query 112137 TGAGACCAAAGTA 112149
||| || |||||
Sbjct 30382 TGAAGCCGAAGTA 30394
>seq219
Length=54288
Score = 104 bits (114), Expect = 3e-17
Identities = 343/522 (66%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| |||||||| || || || || || || || |||||| |||||
Sbjct 42762 GCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCA 42821
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||||||||| | |||||| | ||| | || | | || | ||| ||||||||||
Sbjct 42822 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 42881
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAA 122837
||||| ||| ||||| |||| || || | ||| ||||| ||| ||| | | |
Sbjct 42882 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGA-AGAGTTCTTGTCCTGGAT 42940
Query 122838 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897
||| || || ||||| | |||||||| ||| || || | ||| | || || | ||
Sbjct 42941 CCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGCGTTGAA 43000
Query 122898 TAACT-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 122956
| | | | | | | | ||||| | ||| |||| || | || ||||| |
Sbjct 43001 GAGGTAGGTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGAGAGTATGTCT 43059
Query 122957 CGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATC 123015
|| || | | | ||| ||| | || | ||||||| | || || ||| |||
Sbjct 43060 CGGAGTGGATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGAGCCTCGGGGATC 43118
Query 123016 TGAACCTCATCCGC-AAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 123074
|||||||| |||| ||| | | ||||| ||||| || || || ||||
Sbjct 43119 TGAACCTC-GCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGC 43177
Query 123075 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 123131
|||||| |||||||||| ||||| | ||| || | || |||| || | |||||
Sbjct 43178 AAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCA 43237
Query 123132 GTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||||| | ||| ||||||| ||||| || || || |||||
Sbjct 43238 GTCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCA 43279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628020703274400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |