Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq135 284 1e-71
seq219 152 6e-32
seq18 141 1e-28
>seq135
Length=88816
Score = 284 bits (314), Expect = 1e-71
Identities = 939/1435 (65%), Gaps = 35/1435 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| | ||||| ||||| | || ||| || || ||||||| ||||
Sbjct 30328 CCACAGCACATGATTATGCGAGTGGCTGTTGGCATTTGGGGAGACAACATTGAGCGTGTC 30269
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339
| ||||||||| || |||||| || | | || | || || | || |||||||
Sbjct 30268 CTTGAGACATACCACCTCATGTCC--AGCAAATTCTTTACCCATGCGTCCCCCACCCTCT 30211
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| |||||||| || | | || | ||| |||||| | | | || ||||| |
Sbjct 30210 TCAACGCTGGTACCCCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTTGACATGAAGGACG 30151
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | |||||||| | ||| | | | ||||| || || ||| |||||
Sbjct 30150 ACAGCATTGAGGGTATCTACGATACTTTGAAGACATGTGCCATGATTTCCAAGATGGCTG 30091
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517
| ||||| || | || |||| | | | |||| | ||| ||| ||| || ||
Sbjct 30090 GTGGTATCGGCCTCAACGTCCACCGTATCCGTGCCAC--AGGCTCTTATATCGCCGGCAC 30033
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
||| ||| || | ||||| || || |||||||| || || ||| ||| || | ||
Sbjct 30032 AAACGGTACCTCCAACGGTATCATCCCCATGCTTCGTGTCTTCAACAACACTGCCAGATA 29973
Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631
|| | || | ||| ||||| || | | || |||| || ||||| ||
Sbjct 29972 CGTCGACCAGGGTGGAAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCTTG 29916
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
|||||| ||| || | ||||||||||| | || ||||| || | || |||| ||
Sbjct 29915 GCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGGTCCG 29856
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
||| || || ||| |||||||||||| || ||||| ||||||||| | || ||| |
Sbjct 29855 TGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGCGTCGAGAA 29796
Query 104752 GAG--TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGA-TGCCG 104807
|| ||| ||||| || | | || || | || || ||||| || | || |||
Sbjct 29795 GAACTTGG--ATTGGACTTTGATGTGCCCTAATGAATGC-CCTGGCCTTGCTGACTGCTA 29739
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-- 104865
||| ||||| || || || || || ||||| ||| | || || || | | | ||
Sbjct 29738 TGGC-GAGGAATTCGAGGCTCTGTATGAGAAGTATGAGAAGGAGGGACGTG-GTC-GCAA 29682
Query 104866 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
||| | | |||| | || | ||||| | |||| || || | || || ||||||||||
Sbjct 29681 GACTATCCGAGCT-CAGAAGCTGTGGTACTCTATCCTGGAGGCCCAGACTGAGACTGGTA 29623
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|| | |||||| ||||| || ||| |||| ||||| || || ||||| ||||
Sbjct 29622 ACCCCTTCATGCTCTACAAGGATAGCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAA 29563
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
||| || ||||| ||||| || || || | || | | | |||||| |
Sbjct 29562 CCATCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTCTGCGCCTGATGAGGTCG 29503
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT 105104
|||| || ||| | || || | |||||||| | ||| || | | | || ||
Sbjct 29502 CTGTCTGCAACTTGGCCTCTTTGGCTCTCCCTGCTTTTGTCGA-CTACAACGAAGGATGC 29444
Query 105105 T-TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
| ||| | | |||| || ||||||||||| || || | ||||| ||| | |
Sbjct 29443 TATGACTTTAAAAAGCTTCACGAAGTTACAAAGGTGGTTGTCCGTAACCTCAACCGCATC 29384
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
|| ||| || | ||||| ||| || ||||| || || | | ||||| ||
Sbjct 29383 ATCGATGTGAACTACTACCCTGTTCAGGAGGCTCGCAACAGCAACAGCCGTCACCGACCC 29324
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGA 105282
|||||| | ||||| ||||| || || |||| ||| || || || || | | || ||
Sbjct 29323 ATTGGTGTTGGTGTCCAGGGACTTGCTGATGCTTTCCTTGCTCTG-CGTCTTCCCTTCGA 29265
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| |||||| || | || || || ||||||||||| || || || || ||
Sbjct 29264 ATCACCCGAAGCTCGTGAGCTGAACAAGCAAATCTTTGAGACCATCTACCATGCTGCCCT 29205
Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
|||||| | ||| | || ||||||| ||||| ||| | || |||| || ||
Sbjct 29204 TGAGGCCTCTATGGAGATTGCCAAGGTTGAAGGTCCTTATTCGTCATTCAAGGGATCACC 29145
Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462
|| || |||| | ||||||| ||| |||||||| | || ||| | | ||
Sbjct 29144 CGCCTCTGAAGGCATTCTTCAATATGACATGTGGGATGTCAAGCCCACCGACCTGTGGGA 29085
Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
||||| | |||||||| | || |||||| | |||||||| ||||| | ||| | ||
Sbjct 29084 GTGGGATTCGCTCAAGGAGCAAATTAAGGAGCACGGTCTTCGCAACAGCTTGCTCGTCGC 29025
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
|| ||||| || ||| ||| | || ||||||||||| || || || ||||| |||||
Sbjct 29024 CCCTATGCCCACTGCCAGCACTTCCCAGATCTTGGGTAACAACGAGTGTTTTGAGCCCTA 28965
Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
||| | |||||||| | | || | ||| || || ||||| | ||||||||
Sbjct 28964 CACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGCGAGTTCCAGGTTGTCAAC 28910
>seq219
Length=54288
Score = 152 bits (168), Expect = 6e-32
Identities = 355/523 (68%), Gaps = 13/523 (2%)
Strand=Plus/Minus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||| || || ||| | ||||| || ||||||||| |||| ||||| | | | ||
Sbjct 43279 TGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTGAAC 43220
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| | || ||| | ||||| |||||||||| |||||||||| || || || |||
Sbjct 43219 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATT 43160
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| | | || | ||||| || |||| | || || |||
Sbjct 43159 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCC-GAGGCTCGATG 43101
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | || ||||||||| | ||||
Sbjct 43100 CTTCTACGGTTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACATACTCTCTGCTCA 43042
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 94733
| |||| || | ||||| | | | | | | | | ||||| | || || | ||
Sbjct 43041 TCGACACCTACGTCAAGGA--GCACAGCCAGCGCACCTACCTCTTCAACGCTATTGAGAC 42984
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
| || || |||| ||||| || || ||||| || |||||| | | |||| | |
Sbjct 42983 TATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAGGACAAGAACTC 42924
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
||||||||| |||| ||| | || ||||| ||||||||||||||||||| ||
Sbjct 42923 -TTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGAG 42865
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
|||| | | || | |||||||||||| ||||||||||||| ||||| ||||||||
Sbjct 42864 CCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACCTTCTCCA 42805
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||| ||||||||||||||||| || ||| || |||||
Sbjct 42804 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGC 42762
>seq18
Length=239243
Score = 141 bits (156), Expect = 1e-28
Identities = 284/414 (69%), Gaps = 18/414 (4%)
Strand=Plus/Plus
Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585
||||||||| || ||||| | || || | || ||||| ||| | ||||| || ||||
Sbjct 111133 ATCAAAGCGGCCAGGACGCATCAGGGCCTTGTCCAGGATGTCAGCACGATTGGTACCGGC 111192
Query 9586 GATGACAACAATACCTGTT-TC-ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643
| |||||| | |||||| || | | | || || ||||| ||||| | || ||||||
Sbjct 111193 CAAGACAACGA--CCTGTTCTCGAGTGTTGAATCCGTCCATTTCTGTGAGAATCTGGTTA 111250
Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC--CA 9701
| || ||| ||||| ||||| | | |||| | | || || || || ||
Sbjct 111251 AGGGTAGCTTCGCGTTCGTCATTTCCACCGAATCCACGACCGCT---TTCCTGTCGAGCA 111307
Query 9702 CGGC-------ATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 9754
|||| ||| || || |||||||||| |||||| || ||| | ||| | |
Sbjct 111308 CGGCCGATAGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCATTCTTTCGACCTTCG 111367
Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9814
|||| || || ||||| || | ||||| ||||| ||||||||||| || | |
Sbjct 111368 GCAAACAGGTCTCGTACTCGAGACGGACCCACGCCAACGAACATCTCCACGAACTCAGAA 111427
Query 9815 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873
|| || || | ||| ||||| ||| || || ||| |||| ||||||||||||
Sbjct 111428 CCGCTCACGCTGAA-GAATGGGACGCCAGACTCTCCAGCAGTGGCCTTGGCGAGAAGAGT 111486
Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
||| ||||| ||||| || | ||||| ||||||||| ||||||||||||||
Sbjct 111487 CTTTCCCGTTCCTGGGGGGCCGGAGAGGATGGCACCTCGAGGAATCTTGGCGCC 111540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583250308596360
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