Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq135 268 1e-66
seq38 176 5e-39
seq5 156 5e-33
seq287 125 8e-24
>seq135
Length=88816
Score = 268 bits (296), Expect = 1e-66
Identities = 1130/1760 (64%), Gaps = 67/1760 (4%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || ||||| ||||||||||| |||||||| || ||||||||| | |||
Sbjct 28596 GCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCAGTGAAATGC 28655
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| | | ||| | | |||||| | || |||| |||||||| ||||| ||||||
Sbjct 28656 ATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGTGGATGTTCAAGGACTGGGACTGA 28715
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATT-GACTTTTGTGGAATTTCCCA 80210
|||||||| ||||| || || | ||| | | |||| ||| || | | ||| |||||
Sbjct 28716 TCAATGAAAGCACCACGGTCGGCTGACATCTGGACAATTTGACGTT-GAGAAATCTCCCA 28774
Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACT 80264
|| || |||| |||| || | || | ||||||| || || || | |
Sbjct 28775 AACAGTCTTGTACAGGGCCTT--GATG-TCGGCGGGAATGTTGGGAATGTTCTGGATAGA 28831
Query 80265 GCCACCGTCCTTTACAATTT---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTG 80321
||| || || |||| | || |||| || | ||| | || | |
Sbjct 28832 GCC---GTTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGGCCGGTATCGAC 28888
Query 80322 CAGATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACG 80378
||||| || | ||| | | ||| || | || |||| || || ||| || ||
Sbjct 28889 AAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGA---ACTCGCCAGCAAGGACACGTCG 28945
Query 80379 CAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGT 80438
| | || | ||| | ||||| |||||||| ||||||||| || | |||||| | ||
Sbjct 28946 CTGGTAGATGTTGGAGGTGTAGGGCTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGT 29005
Query 80439 GCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC 80498
||| || || ||||| ||| |||| | || || || || ||||||| ||| || |
Sbjct 29006 GCTGGCAGTGGGCATAGGGGCGACGAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTG 29065
Query 80499 CTC---GCGCAAATCTGACCAAAAATCAACCCCAA--CGCTG----TGAC--CCCACATG 80547
||| | || |||| || || || || || || |||| ||||||||
Sbjct 29066 CTCCTTGAGCGAATCCCAC------TC--CCACAGGTCGGTGGGCTTGACATCCCACATG 29117
Query 80548 TCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCC 80607
|| | || | ||||| || || || || || ||| ||| | | || || || ||
Sbjct 29118 TCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACGAATAAGGACCTTCA 29177
Query 80608 GTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCC 80667
|||||| | ||| || || |||||| || || || ||| |||||||| |
Sbjct 29178 ACCTTGGCAATCTCCATAGAGGCCTCAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGC 29237
Query 80668 TTGTTCACACCGCGCGCCTGTGGGTCGTCGAACG--ACAAGCCCATCATCATGAACACGT 80725
||||||| | || || | || ||||| | | | || | || | ||| | |
Sbjct 29238 TTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGACGCAGAGCA--AGGAAAGCAT 29295
Query 80726 CAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCC 80784
|||| || ||||| || || | | || || ||||| || |||| | | || |||
Sbjct 29296 CAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGGCTGTT-GCTGTTGCGAGCC 29354
Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844
||| ||| ||||| |||| |||||||| |||||| ||||| || ||| ||| |
Sbjct 29355 TCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTT 29414
Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAA------TTGGTTCCCCTTCACAAATGCCGGA 80898
||||| || ||||| || | |||||| | || ||| | ||||| || ||
Sbjct 29415 GTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTGTAGTCGACAAAAGCAGGG 29474
Query 80899 AGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATT 80958
|| || || |||| ||||| || || ||||| |||| | | |||| | ||
Sbjct 29475 AGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATC 29534
Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018
|| ||||| | || || || || |||||||| |||||||| |||| ||||
Sbjct 29535 TCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG 29594
Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078
|| ||||||||| |||| | ||| |||| ||||| ||| | || ||||| | |
Sbjct 29595 CAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAG 29654
Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCG 81138
| ||| | || | || || |||||| || || | ||||||| |
Sbjct 29655 TACCACAGCTTCTGAGCTCGGATAGTCTTGCGACCACGTCCCTCCTTCTCATACTTCTCA 29714
Query 81139 TAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCA 81197
|| | ||||| | | || | | ||| ||| ||| | ||||| || ||||||||
Sbjct 29715 TACAGAGCCTCGAATTCCTCGCCATAGCAGT-CAGCAAGGCCAGGGCATTCATTAGGGCA 29773
Query 81198 CATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAG 81257
||||| ||| || || ||||| || ||||||||| ||||||||||||||
Sbjct 29774 CATCAAAGTCCAATCCAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAG 29833
Query 81258 GGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317
||| ||||||||| ||| || |||| || | || ||||| ||| | || ||
Sbjct 29834 AGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAG 29893
Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG 81377
|| || | || || || ||||| ||||| || || | ||| | | || ||
Sbjct 29894 GAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTT 29953
Query 81378 G---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
| |||||||||| |||||| | |||||| ||| || ||||| | ||| ||||||||
Sbjct 29954 GTTTCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGAT 30013
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTG 81492
||| | || |||||| || || ||||| || || |||| || || ||
Sbjct 30014 ACCGTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGAC 30073
Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552
||| || ||||| ||||| | | ||| |||||| ||||| |||| || ||
Sbjct 30074 GTTG--AGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCG 30131
Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612
|| || ||||| ||||| || | |||||||||| |||||| || || | |||| |
Sbjct 30132 TAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGA--G 30189
Query 81613 CTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670
||| | | || || ||||| || || |||| ||| || | || | | | ||||
Sbjct 30190 CTTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACA 30249
Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730
| |||| || || || ||| || ||| | ||| || ||| || | ||| || |
Sbjct 30250 TGAGGTGGTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCAAATGCCAACAGCCACTC 30309
Query 81731 GCATAAACATGTACTGGGGC 81750
|||||| ||||| ||| |||
Sbjct 30310 GCATAATCATGTGCTGTGGC 30329
>seq38
Length=159530
Score = 176 bits (194), Expect = 5e-39
Identities = 179/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||||||||| || || || ||||| |||||| |
Sbjct 139008 ATGCAGATCTTCGTCAAGACTTTAACCGGCAAGACAATCACACTGGAGGTGGAGTCATCT 139067
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | || | || || |||||||||||||| ||||| || ||||||
Sbjct 139068 GATACCATCGACAATGTCAAATCAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 139127
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || |||||||||||||| || || || | ||||||||| ||| ||||| ||
Sbjct 139128 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGTACCCTGAGC-GACTACAA 139186
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||| ||||| | || | ||||| || ||||| ||
Sbjct 139187 CATCCAGAAGGAGAGCACCCTTCACTTGGTTCTCCGTCTGCGTGGTGGCCA 139237
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || ||||||||||| || || || ||||| |||||
Sbjct 138495 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 138554
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| | || || |||||||||||||| |||||||| ||||||
Sbjct 138555 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 138614
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||| ||||| |||| || || || | ||||| ||
Sbjct 138615 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGGACTCTGTCCGACTACAAC 138674
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| ||||| | || | || ||||| |||||
Sbjct 138675 ATCCAGAAGGAGTCCACCCTTCACTTGGTTCTCCGCCTTCGTGGTGG 138721
Score = 163 bits (180), Expect = 3e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
||||| || || ||||||||||| || ||||||||||| |||||| |||| ||| |
Sbjct 138792 GTCAAAACCCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCCGATACCATCGAC 138851
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || |||||||||||||| || ||||| |||||||||||||| ||
Sbjct 138852 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATC 138911
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||||||||| || ||||| | || || || | ||||| || |||| |||||
Sbjct 138912 TTCGCTGGTAAGCAGCTTGAGGACGGCCGGACTCTGTCCGACTACAACATCCAGAAGGAG 138971
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || | ||| | ||||| || |||||
Sbjct 138972 TCTACTCTCCACTTGGTCCTTCGTCTGCGTGGTGG 139006
>seq5
Length=314554
Score = 156 bits (172), Expect = 5e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || |||||||| |||||
Sbjct 52549 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 52490
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || || |||||||||||||| ||||| || ||||||
Sbjct 52489 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 52430
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || || ||||||||||| |||||||||| || ||||| ||| ||||| ||
Sbjct 52429 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 52371
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| |||| || || |||||
Sbjct 52370 CATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 52323
>seq287
Length=39990
Score = 125 bits (138), Expect = 8e-24
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 27405 AATGC--AAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
||||| ||| || || ||||| || || |||||||| || || |||||||| |||||
Sbjct 4667 AATGCGAAAAGTTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCC 4608
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | || | ||| | ||| | || || |||||||||||||||||||| || ||
Sbjct 4607 TCCGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAT 4548
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| | || || ||||| ||||| |||||||||| || ||||| | |||||
Sbjct 4547 CAGCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCTGACTAC 4488
Query 27583 AATGTCCAAAAGG 27595
|| |||| ||||
Sbjct 4487 AACATCCAGAAGG 4475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570300141541680
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