Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq38 105 6e-18
>seq38
Length=159530
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| ||||| |||||||||||| | || |||||||| || || | ||||| | || ||
Sbjct 138792 GTCAAAACCCTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCCGATACCATCGAC 138851
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| ||||| || || || ||||| || || || || || || || |||||| | ||
Sbjct 138852 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATC 138911
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| ||| || || || | || ||| | ||| | ||||| |||||||| || ||||||
Sbjct 138912 TTCGCTGGTAAGCAGCTTGAGGACGGCCGGACTCTGTCCGACTACAACATCCAGAAGGAG 138971
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || | || ||||| | ||| |||| ||||| ||
Sbjct 138972 TCTACTCTCCACTTGGTCCTTCGTCTGCGTGGTGGTAT 139009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434910576905280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |