Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 6e-12 >seq56 Length=137465 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553 |||| |||| |||||| ||||| ||||| || | ||||| | || || ||||| Sbjct 86315 ATTTCCAGCTCGGGGAAAGGTCGCGGCTCGCGCTCTAGCTGTGTTCGAAGAGCGTCGATA 86374 Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACC 6611 |||| | ||||| ||| || || |||| |||| | | || | || ||| | | Sbjct 86375 TGGTCAATGTAGACATGTGCGTCGCCCATGACGTGGGTAA-AGGTTCCTGGGACAAGATC 86433 Query 6612 CCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCC 6671 || || ||||||| ||| | || |||| ||||| || |||||||||||||| | | Sbjct 86434 GCAA-ACGTGAGCGAGCATATGTGTCAGCAATGCGTAGCTGGCAATGTTGAACGGGATGC 86492 Query 6672 CTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 | | |||||||| | ||||| || || ||||||||| Sbjct 86493 CCAGACCCATGTCGCAGGATCGCTGGTATAGCTGGCAG 86530 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||||||||| || || ||||| | |||||||| | || | |||||||||||||| || Sbjct 86530 CTGCCAGCTATACCAGCGATCCTGCGACATGGGTCTGGGCATCCCGTTCAACATTGCCAG 86471 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| |||| || | ||| ||||||| || || | | ||| || | || | Sbjct 86470 CTACGCATTGCTGACACATATGCTCGCTCACGT-TTGCGATCTTGTCCCAGGAACCT-TT 86413 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| || || ||| ||||| | |||| ||||| || || | ||| Sbjct 86412 ACCCACGTCATGGGCGACGCACATGTCTACATTGACCATATCGACGCTCTTCGAACACAG 86353 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAAT 34851 || | || ||||| ||||| |||||| |||| |||| Sbjct 86352 CTAGAGCGCGAGCCGCGACCTTTCCCCGAGCTGGAAAT 86315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254336880080