Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq38 98.7 9e-16
>seq38
Length=159530
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || |||||||| || || || || || ||| || || || |||| ||
Sbjct 139216 ACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCGTCTTCC 139157
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || ||||| ||||||||||||||||| | ||| | | ||| |||||| |
Sbjct 139156 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGG 139097
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || ||||| | | | ||||| |||||||| |||| ||||| | ||
Sbjct 139096 ATCTTTGATTTGACATTGTCGATGGTATCAGATGACTCCACCTCCAGTGTGATTGTCTTG 139037
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || | || || || ||||| |||||
Sbjct 139036 CCGGTTAAAGTCTTGACGAAGATCTGCAT 139008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429538066709807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |