Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq56 91.5 1e-13
>seq56
Length=137465
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||||||||| ||||| || || || ||||| || | || | |||| || |
Sbjct 86789 AAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTGA-G 86847
Query 30077 CCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| | |||| | || || | ||| |||||| ||||||||||||| || || ||
Sbjct 86848 CCCGACGCTGTCAAGGAACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTC 86907
Query 30136 GGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194
| ||| | ||||| ||| ||||| || |||||| |||||||| | | |||||
Sbjct 86908 GCTGAGGGCGGTGGAGGAGGTGTTGCCCTC-GATGAACCAGAGCAGCTCGGCGATGACGG 86966
Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230
| ||||| | |||||| |||||||||||||
Sbjct 86967 CGCGGAGGAAGACTCGCTTGGTGGTGAGGAGGGGAA 87002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406156076785954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |