Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq56 91.5 1e-13 >seq56 Length=137465 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| ||||| || || || ||||| || | || | |||| || | Sbjct 86789 AAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTGA-G 86847 Query 30077 CCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| | |||| | || || | ||| |||||| ||||||||||||| || || || Sbjct 86848 CCCGACGCTGTCAAGGAACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTC 86907 Query 30136 GGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 | ||| | ||||| ||| ||||| || |||||| |||||||| | | ||||| Sbjct 86908 GCTGAGGGCGGTGGAGGAGGTGTTGCCCTC-GATGAACCAGAGCAGCTCGGCGATGACGG 86966 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 | ||||| | |||||| ||||||||||||| Sbjct 86967 CGCGGAGGAAGACTCGCTTGGTGGTGAGGAGGGGAA 87002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406156076785954