Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq56 105 5e-18 >seq56 Length=137465 Score = 105 bits (116), Expect = 5e-18 Identities = 254/379 (67%), Gaps = 4/379 (1%) Strand=Plus/Plus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || || || |||||| |||||||| |||||||| |||| | ||| || Sbjct 86626 GTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTTTTGGGTTCCATGCGCTGAGGATCAT 86685 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 | | || | |||||||| | || || | | | |||||| || || || Sbjct 86686 TCTGCGATCATAGGGGTTGTTGCGGAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGCC 86745 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 | | || | ||| ||| || | ||| || || || || || |||| ||| ||||| Sbjct 86746 CTTGCCGGCGTAATCTGCCTTTGCGTCGACATAGTCGGCGCCAAAGTGCCGCCACTGGAA 86805 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAAA 27586 ||||| || || || ||||| || | || | |||| || |||| | |||| | | Sbjct 86806 GCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTGA-GCCCGACGCTGTCAAGGA 86864 Query 27587 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 27646 | || | ||| |||||| ||||||||||||| || || ||| ||| | ||||| Sbjct 86865 ACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCTGAGGGCGGTGGAGG 86924 Query 27647 TTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 27705 ||| ||||| || |||||| |||||||| | | |||||| ||||| | | Sbjct 86925 AGGTGTTGCCCTC-GATGAACCAGAGCAGCTCGGCGATGACGGCGCGGAGGAAGACTCGC 86983 Query 27706 TTGGTCGTGAGGAGGGGAA 27724 ||||| ||||||||||||| Sbjct 86984 TTGGTGGTGAGGAGGGGAA 87002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369500719652009