Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq56 105 5e-18
>seq56
Length=137465
Score = 105 bits (116), Expect = 5e-18
Identities = 254/379 (67%), Gaps = 4/379 (1%)
Strand=Plus/Plus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
|||||| || || || |||||| |||||||| |||||||| |||| | ||| ||
Sbjct 86626 GTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTTTTGGGTTCCATGCGCTGAGGATCAT 86685
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467
| | || | |||||||| | || || | | | |||||| || || ||
Sbjct 86686 TCTGCGATCATAGGGGTTGTTGCGGAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGCC 86745
Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527
| | || | ||| ||| || | ||| || || || || || |||| ||| |||||
Sbjct 86746 CTTGCCGGCGTAATCTGCCTTTGCGTCGACATAGTCGGCGCCAAAGTGCCGCCACTGGAA 86805
Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAAA 27586
||||| || || || ||||| || | || | |||| || |||| | |||| | |
Sbjct 86806 GCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTGA-GCCCGACGCTGTCAAGGA 86864
Query 27587 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 27646
| || | ||| |||||| ||||||||||||| || || ||| ||| | |||||
Sbjct 86865 ACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCTGAGGGCGGTGGAGG 86924
Query 27647 TTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 27705
||| ||||| || |||||| |||||||| | | |||||| ||||| | |
Sbjct 86925 AGGTGTTGCCCTC-GATGAACCAGAGCAGCTCGGCGATGACGGCGCGGAGGAAGACTCGC 86983
Query 27706 TTGGTCGTGAGGAGGGGAA 27724
||||| |||||||||||||
Sbjct 86984 TTGGTGGTGAGGAGGGGAA 87002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369500719652009
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |