Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq135 161 1e-34
>seq135
Length=88816
Score = 161 bits (178), Expect = 1e-34
Identities = 1018/1618 (63%), Gaps = 32/1618 (2%)
Strand=Plus/Plus
Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||| ||| | ||| ||||| || || | || |||| | ||||| || ||||||||
Sbjct 28559 TTCTTGATCGACTGTGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACAT 28618
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
||||| || ||||| || |||| || |||||||||||| || | ||| |
Sbjct 28619 GCCAGTCTTGAGACCAAGCTTCCAGCCAGTGAAATGCATGCTGGTAATCTTGCCCATTGT 28678
Query 76889 AGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 76948
||||| || || || |||| ||||| ||||| |||||||| || | || ||
Sbjct 28679 GGGATCCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGC 28738
Query 76949 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008
| ||| | | ||| ||||| ||| ||||||| ||| ||| | | |||||
Sbjct 28739 TGACATCTGGACAATTTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGAT 28798
Query 77009 ATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTT 77065
|| | |||| ||| | | || || || || || || | || || |||||
Sbjct 28799 GTCGGCGGGAATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGATGCGGTTCTT 28858
Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125
||| |||| ||| | | || | | | | || || || || || |
Sbjct 28859 CATAGCATCGGACCAAAGGCCGGTATCGACAAGATCCTTGAGAAGCCAGGGGTTGACAAC 28918
Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185
|| || || |||| | || | || ||| || || ||| || || || | | |
Sbjct 28919 CTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACA 28978
Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245
|| ||||| ||||| || || | ||| ||||| |||||||| || || | || ||
Sbjct 28979 CTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCT 29038
Query 77246 ATTTCTGAGACCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 77303
|| | ||||| ||| || | |||| || || || | | ||| ||||| || ||
Sbjct 29039 GTTGCGAAGACC--GTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCACAGGTCG 29096
Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA 77363
| || |||||||| | || ||||| ||||| || | | || |||||| ||
Sbjct 29097 GTGGGCTTGACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTG 29156
Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423
||| |||||| ||||| | || | || | || || | || | |
Sbjct 29157 AATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAGAGGCCTCAAGGGCAGCATGG 29216
Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483
|| || || || || || | ||| || || || | ||||| || || ||| |
Sbjct 29217 TAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGA 29276
Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543
| | | || || ||||| || | |||||| || |||| |||||| |||| || |
Sbjct 29277 CGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGG 29336
Query 77544 TTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGA 77603
| ||| | ||| || ||| ||| || || || | || || || |||||
Sbjct 29337 CTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGG 29396
Query 77604 TTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC--TA 77661
|| | ||||| || || || || | || || ||| ||| | | ||| || |
Sbjct 29397 TTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTG 29456
Query 77662 TA----ACAAA--CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
|| ||||| || | | ||| | ||| || | || || || || ||||||| ||
Sbjct 29457 TAGTCGACAAAAGCAGGG--AGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAG 29514
Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775
| || | || ||||| || || || || | ||| || ||||| || |
Sbjct 29515 GCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCT 29574
Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835
||||||||||| ||||| ||||| || || || || || | || || |||
Sbjct 29575 TCTGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAG 29634
Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGT-ATCG 77893
|||| | || | ||||| | ||| | | ||| |||| || || ||| | |
Sbjct 29635 TCTGGGCCTCCAGGATAGAGTACCACA-GCTTCTGAGCTCGGAT---AGTCTTGCGACCA 29690
Query 77894 CCTCTCTCTTTC--ATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAA-CA-TCAT 77949
| || ||| ||| ||| | ||| || || ||||| ||| ||| | || |||
Sbjct 29691 CGTCCCTCCTTCTCATACTTCTCATACAGAGCCTCGAATTC--CTCGCCATAGCAGTCAG 29748
Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGT 78008
| | |||||||||||||| ||||||||||| | ||| | || |||| || || ||
Sbjct 29749 CAAGGCCAGGGCATTCATTAGGGCACATCAAAGTCCAATCCAAGTTCTT-CTCGACGCGC 29807
Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068
||||| || |||||||| ||||| ||||| | || || || |||| | |||||
Sbjct 29808 TTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCC 29867
Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128
|| || ||||| || || || ||||| | | ||| | ||||| || || ||
Sbjct 29868 TTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGG 29927
Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188
|| || || | | ||||| || || || || ||||| || | |||||||| |||||
Sbjct 29928 TAGATGGCAAAGGCACCAGGACGCTTGTTTCCACCCTGGTCGACGTATCTGGCAGTGTTG 29987
Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248
|| | || | | ||| || || |||||||| || || || ||||| || | ||||||
Sbjct 29988 TTGAAGACACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTGCCGGCGATATAA 30047
Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308
|| | || || ||| | | | || || || || |||||||| || ||
Sbjct 30048 GAGCCTGTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATC 30107
Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAA 78366
| || || ||||| ||||||||||||||||| || ||||| ||| |||||| ||
Sbjct 30108 ATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAA 30165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694656304644960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |