Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq135 170 3e-37
>seq135
Length=88816
Score = 170 bits (188), Expect = 3e-37
Identities = 1022/1618 (63%), Gaps = 32/1618 (2%)
Strand=Plus/Plus
Query 75365 TTCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423
||||| ||| | |||||||| || || | | || | | ||||| || ||||||||
Sbjct 28559 TTCTTGATCGACTGTGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACAT 28618
Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483
||||| || ||||| || |||| || |||||||||||| || | ||| |
Sbjct 28619 GCCAGTCTTGAGACCAAGCTTCCAGCCAGTGAAATGCATGCTGGTAATCTTGCCCATTGT 28678
Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543
||||| || || || |||| ||||| ||||| |||||||| || | || ||
Sbjct 28679 GGGATCCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGC 28738
Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603
| ||| | | ||| ||||| ||| ||||||| ||| ||| | | |||||
Sbjct 28739 TGACATCTGGACAATTTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGAT 28798
Query 75604 ATCATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660
|| | |||| || | | || || || || ||| |||| || || |||||
Sbjct 28799 GTCGGCGGGAATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGATGCGGTTCTT 28858
Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720
|| |||| ||| | | ||| | | | | || || || || ||||
Sbjct 28859 CATAGCATCGGACCAAAGGCCGGTATCGACAAGATCCTTGAGAAGCCAGGGGTTGACAAC 28918
Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780
|| || || |||| | || | ||| ||| || || ||| || || || | | |
Sbjct 28919 CTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACA 28978
Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840
|| ||||| ||||| || || | ||| ||||| |||||||| || || | || ||
Sbjct 28979 CTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCT 29038
Query 75841 ATTTCTGAGACCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 75898
|| | ||||| ||| || | |||| || || || | | ||| ||||| || ||
Sbjct 29039 GTTGCGAAGACC--GTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCACAGGTCG 29096
Query 75899 GATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTA 75958
| || |||||||| | || ||||| ||||| || | || |||||| ||
Sbjct 29097 GTGGGCTTGACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTG 29156
Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018
||| |||| || || | || | || | ||||| | ||| | |
Sbjct 29157 AATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAGAGGCCTCAAGGGCAGCATGG 29216
Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078
|| || || || || || | ||| || || || | ||||| | || || ||| |
Sbjct 29217 TAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGA 29276
Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138
| | | || || ||||| || |||||||| || |||| |||||| |||| || |
Sbjct 29277 CGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGG 29336
Query 76139 TTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198
| ||| | ||| || ||| |||||| || || | ||| || || |||||
Sbjct 29337 CTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGG 29396
Query 76199 TTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC---- 76254
|| | |||||| || || || || | || || ||| ||| | ||| ||
Sbjct 29397 TTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTG 29456
Query 76255 TA-TC-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
|| || ||||| | ||||| | ||| || | || || || || ||||||| ||
Sbjct 29457 TAGTCGACAAAAGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGC 29516
Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372
| || | || ||||| ||||| || || | ||| ||||| || || |
Sbjct 29517 GCAGAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 29576
Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432
||||||||||| ||| || ||||| || || | || || | ||||| ||| ||
Sbjct 29577 TGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 29636
Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGT-ATCGCT 76490
|| | || | ||||| | ||| | | ||| |||| || || ||| | | |
Sbjct 29637 TGGGCCTCCAGGATAGAGTACCACA-GCTTCTGAGCTCGGAT---AGTCTTGCGACCACG 29692
Query 76491 TCTCTCTTTC--ATA-TTGTG-TATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCAT 76544
|| ||| ||| ||| || | || | | || || ||||| ||| ||| | || |||
Sbjct 29693 TCCCTCCTTCTCATACTTCTCATACAGAGCC--TCGAATTC--CTCGCCATAGCAGTCAG 29748
Query 76545 CCAAACCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGT 76603
| | ||||| |||||||| || |||||||| | ||| || | ||||| | || ||
Sbjct 29749 CAAGGCCAGGGCATTCATTAGGGCACATCAAAGTCCAATCCAAGTTCTTC-TCGACGCGC 29807
Query 76604 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCA 76663
||||| || |||||||| ||||| ||||| | || || || |||| | |||||
Sbjct 29808 TTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCC 29867
Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723
|| || ||||| || || |||||||| | | ||| | ||||| || || ||
Sbjct 29868 TTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGG 29927
Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783
|| || || | |||| || || || || || ||||| || | ||||||||||||||
Sbjct 29928 TAGATGGCAAAGGCACCAGGACGCTTGTTTCCACCCTGGTCGACGTATCTGGCAGTGTTG 29987
Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843
|| | || | | ||| || || || ||||| || ||||| ||||| || | ||||||
Sbjct 29988 TTGAAGACACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTGCCGGCGATATAA 30047
Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903
|| ||||| ||| | ||||| || || || ||||| || || ||
Sbjct 30048 GAGCCTGTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATC 30107
Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA 76961
| ||||| ||||| || || ||||| ||||| || || || ||| |||||| ||
Sbjct 30108 ATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAA 30165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712921576092480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |