Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq35 116 8e-21
>seq35
Length=1329723
Score = 116 bits (128), Expect = 8e-21
Identities = 272/405 (67%), Gaps = 4/405 (1%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||||| ||| | |||| | ||||||||||| | || |||||| |||
Sbjct 994463 CCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCA 994404
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355
|| ||| |||||||| || || || | | || || | | | || | || ||
Sbjct 994403 TCTCTCGTGACGAGGGCCTGCA-CACCGACTTTGCTTGCCTGCTCCACTCTCACCTGAAG 994345
Query 230356 AACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414
||| || | || |||| || ||||||| || || || || || ||| |
Sbjct 994344 AACCGCGCCAGCAAG-GAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCA 994286
Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474
|||||| | || ||| | || ||| || | ||||||||||| || |||
Sbjct 994285 AGAGTTCTTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCACCCTGATGAA 994226
Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534
|||||||| || || || ||||| || | | || || ||||| ||||||| | ||
Sbjct 994225 GCAGTACATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAGATTTA 994166
Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594
||| || |||||||||| || |||||| ||| || || || |||||||||||
Sbjct 994165 CAAGTCCTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTT 994106
Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
|||||| ||||||||| | || || |||| | | ||||| |||||
Sbjct 994105 CTTCGAGAAGCGTGTCGGCGAGTACCAGAAGGCCGGTGTCATGAA 994061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822224508530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |