Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq35 138 1e-27
>seq35
Length=1329723
Score = 138 bits (152), Expect = 1e-27
Identities = 556/866 (64%), Gaps = 31/866 (4%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| || || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 994079 TGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCC 994138
Query 16736 ATGAAATCAAAAGGATT--AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| ||||| || || || | || |||| || | | | || || || ||| |
Sbjct 994139 ATGAAGTCAAAGGGGTTGGAGGACTTGTAAATCTTCTCG--TTGCCAAGAGCGACGAGCA 994196
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| ||| || ||||| || || || || ||| | | |||||| || | |||
Sbjct 994197 GACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAGA- 994255
Query 16854 GTACCGGA-AGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT- 16911
| || || ||||| || ||||| || |||||| || || || || | || ||
Sbjct 994256 GCACAGGGGAGAGCCTCGGTCAAGAACTCTTGCTCGATTCTGACGGCATCAGTGATGATT 994315
Query 16912 --ACTAGCAA-CTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
|| || ||| || || | |||| || || || | ||| || ||
Sbjct 994316 TCACGGATAATCTCCTTGCTGGCGCGGTTC----TTCAGGTGAGAGTGGAGCAGGCAAGC 994371
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
|| ||| || | |||||||| | ||| || ||||| || || |||| || ||
Sbjct 994372 AAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGG 994431
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| |||| ||||| | ||| || || | ||| || | || ||||| |||||
Sbjct 994432 CATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATACC 994491
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|||||||| ||||| || | | || | || | | | ||| |||| | |||||
Sbjct 994492 CTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTGGATCCA 994551
Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA--- 17205
|| |||| || || || | |||||| || || || ||||| || ||
Sbjct 994552 CTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 994611
Query 17206 -TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264
|| || | || |||| | || | | || || |||||||| ||| ||| | |
Sbjct 994612 GTAGTTGCGCTGG---CTGT-GCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTCT 994667
Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324
||||||| ||||||||||| ||||| || ||||| |||||||| || || | || |
Sbjct 994668 CGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCT 994727
Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384
|||| || || ||| || || | || || ||||| || ||||||||| || || |
Sbjct 994728 GAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCAA 994787
Query 17385 AAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------CC 17438
| || |||| || || ||||| || || ||||| | || ||| ||
Sbjct 994788 AGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG---GCGGTTGTTCC 994844
Query 17439 AGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCT 17498
|||| | | ||| ||||| | ||| | ||||||| |||||| || |||| | ||||
Sbjct 994845 AGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCT 994904
Query 17499 TTTTATACATATTCCAAATATCATTG 17524
|||| ||||| | ||| || | ||||
Sbjct 994905 TTTTGTACATTTGCCAGATCTAATTG 994930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544752519080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |