Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq24 165 1e-35
>seq24
Length=1542676
Score = 165 bits (182), Expect = 1e-35
Identities = 277/399 (69%), Gaps = 4/399 (1%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | ||| ||||||||||| |||||| | |||| |||
Sbjct 36817 ACGTAGAACTGGGCAAACATGTGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTTGGG 36758
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989
||||| ||| |||||| | || | | | |||| | | | || || |
Sbjct 36757 TTCCATGCGCTGAGGATCATTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATGATC 36698
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
|| |||||||| ||||||| || ||| ||||| | | || || || | ||
Sbjct 36697 TCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACATAGTCTGCG 36638
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109
|| ||||||| ||||||||| ||||||||||| |||||||| ||| || | |||
Sbjct 36637 CCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG 36578
Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167
|||||| | | | ||||||| || ||||| |||||| ||||||||||||||||||| |
Sbjct 36577 AGCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACG 36518
Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227
|||| ||| | | |||| ||| ||| |||||||||||| ||||| ||| ||
Sbjct 36517 TCGCTGAGGG--CGGTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGA 36460
Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| | | |||||| | ||||||||| ||||||||||
Sbjct 36459 CGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 36421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590075833749240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |