Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq24 165 1e-35 >seq24 Length=1542676 Score = 165 bits (182), Expect = 1e-35 Identities = 277/399 (69%), Gaps = 4/399 (1%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||| ||||||||||| |||||| | |||| ||| Sbjct 36817 ACGTAGAACTGGGCAAACATGTGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTTGGG 36758 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| ||| |||||| | || | | | |||| | | | || || | Sbjct 36757 TTCCATGCGCTGAGGATCATTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATGATC 36698 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || |||||||| ||||||| || ||| ||||| | | || || || | || Sbjct 36697 TCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACATAGTCTGCG 36638 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 || ||||||| ||||||||| ||||||||||| |||||||| ||| || | ||| Sbjct 36637 CCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG 36578 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167 |||||| | | | ||||||| || ||||| |||||| ||||||||||||||||||| | Sbjct 36577 AGCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACG 36518 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| ||| | | |||| ||| ||| |||||||||||| ||||| ||| || Sbjct 36517 TCGCTGAGGG--CGGTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGA 36460 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | | |||||| | ||||||||| |||||||||| Sbjct 36459 CGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 36421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075833749240