Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq77 87.8 2e-12 >seq77 Length=2105403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 |||||| || | ||||||||| ||| | ||| | ||| || || |||||| || Sbjct 1827225 CAGCTGAGCAACCCGGTCGCCCTCCTTGATCTCATAGTCGGCGTCTGCGTGGTTGAAGAG 1827284 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | ||| ||| |||||||| || ||||| || ||||| ||||| ||||||||| Sbjct 1827285 GAGCACCTTGACGGGTCCGCGGTAATCTGCGTCGATGACGCCGGCGCCGGTGTCGATGAA 1827344 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||| || ||||| ||||| ||||| | ||||||| Sbjct 1827345 GTGCTTGGAGGCGAGGCCAGAGCGAGGAGCAATTCGGCCGT 1827385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053713391272