Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq77 87.8 2e-12
>seq77
Length=2105403
Score = 87.8 bits (96), Expect = 2e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652
|||||| || | ||||||||| ||| | ||| | ||| || || |||||| ||
Sbjct 1827225 CAGCTGAGCAACCCGGTCGCCCTCCTTGATCTCATAGTCGGCGTCTGCGTGGTTGAAGAG 1827284
Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712
| ||| ||| |||||||| || ||||| || ||||| ||||| |||||||||
Sbjct 1827285 GAGCACCTTGACGGGTCCGCGGTAATCTGCGTCGATGACGCCGGCGCCGGTGTCGATGAA 1827344
Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||||||| || ||||| ||||| ||||| | |||||||
Sbjct 1827345 GTGCTTGGAGGCGAGGCCAGAGCGAGGAGCAATTCGGCCGT 1827385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430053713391272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |