Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq66 333 7e-86
>seq66
Length=2244893
Score = 333 bits (368), Expect = 7e-86
Identities = 1068/1635 (65%), Gaps = 44/1635 (3%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || || ||| | || || | | ||| ||||| || | | | ||| |||| ||
Sbjct 1021498 TTTACCCATGCCTCTCCCACCCTCTTCAACGCTGGTACCCCACAAGCTCAGCTGTCCTCA 1021439
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||||||||| ||| |||||||||| ||||| || ||||
Sbjct 1021438 TGCTTCCTGGTGGACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTAAAGACA 1021379
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | |||||||||| || || || || || | | || ||||| | | |||||
Sbjct 1021378 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGCCTGAACG-TCCACCGTATCCGTGC 1021320
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
| | ||||||| |||||| || ||| || || | | |||||||||||
Sbjct 1021319 TACGGGCTCTTACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTTCG 1021260
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
|| || |||| ||||| || ||||||||||||||||| |||||| || || ||
Sbjct 1021259 AGTCTTCAACAACACTGCCAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTT 1021200
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AA 363904
||| || || ||||||||| || |||||| | |||||||| ||||| ||||| || ||
Sbjct 1021199 TGCCATCTACCTCGAGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAA 1021140
Query 363905 ACACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962
||||| || |||||| | ||||| ||||| |||||| || || ||| | ||||
Sbjct 1021139 CCACGGCAAGGAAGAGG---TCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGA 1021083
Query 363963 CCATTTTATGAAGCGCGTGGAGGCAGGTAAGAA-TTGGTC---ACTCT--TTTGCCCACA 364016
| || |||||||| || ||| ||||| |||| | ||| | | ||||| |
Sbjct 1021082 TCTGTTCATGAAGCGTGTTGAG------AAGAACTTGGACTGGACTTTGATGTGCCCCAA 1021029
Query 364017 CGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAG 364074
|||||| || || ||| | || || ||| || || || | | ||||| || || |||
Sbjct 1021028 CGAATGCCCTGGCCTTGCTGACTGCTAT--GGCGAAGAATTCGAGGCTCTGTATGAGAAG 1020971
Query 364075 TATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
|| || |||||| |||| ||| ||||| || | || |||||||| |||| |||||
Sbjct 1020970 TACGAGAAGGAGGGCAAGGGTCGCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCCATC 1020911
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
| || | |||| |||||| || | |||| |||| | ||||| ||| | |||||||||
Sbjct 1020910 CTAGAGGCCCAGACTGAGACTGGTAACCCCTTTATGCTTTACAAGGATGCCTGCAACCGC 1020851
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTAT 364253
||| ||||||| || |||| || || | || | || |||||| || || ||||| |
Sbjct 1020850 AAGAGCAACCAGAAGAACCTGGGAACCA-TCCGAAGCTCCAACCTCTGCACTGAGATCGT 1020792
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||| ||| | || || |||||| || || || ||| | || || | || || || ||
Sbjct 1020791 TGAGTACTCTGCCCCTGACGAGGTCGCTGTCTGCAACTTGGCCTCTTTGGCTCTCCCTGC 1020732
Query 364314 GTTTGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCA 364367
||||| || || || | |||| || | ||| | || || ||| |
Sbjct 1020731 CTTTGTCGACTATAACGAAGGCTGCTATGACTTTAAGAAGCTTCACGATGTTACCAAGGT 1020672
Query 364368 TGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG 364426
| | | || ||| || | ||||| ||| || || || ||| || || ||
Sbjct 1020671 GGTTGTCCGTAACCTCAACCGCATCATCGATGTGAACTACTACCCCGTTCAGGAGGCTCG 1020612
Query 364427 -AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485
| | ||| | || || || || |||||| ||||||| ||||| || ||||||| |
Sbjct 1020611 CAAC--AGTAACAGCCGCCACCGACCCATTGGTGTTGGTGTTCAGGGTCTTGCTGACGCT 1020554
Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545
|| | || | | || || || || || ||||| | | || ||| | |||
Sbjct 1020553 TTCCTCGCTCTGCGTCTTCCTTTCGAATCACCCGAAGCTCGCGAGTTGAACAAGCAAATC 1020494
Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGA 364605
||||| || || || || || | || || || | || || | | ||||
Sbjct 1020493 TTTGAGACCATCTACCACGCTGCCCTCGAGGCATCTATGGAGATTGCCAAGATCGAGGGT 1020434
Query 364606 AAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG 364665
|| | | |||| || || || | || | |||||||||| | |||
Sbjct 1020433 CCTTATGAGTCATTCAAGGGATCACCCGCCTCTGAAGGCATTCTCCAGTTTGACTTGTGG 1020374
Query 364666 AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCA 364724
|||||| ||| ||| || ||| | ||||| |||| | | | | ||||| ||||
Sbjct 1020373 GATGTCAAGCCCACTGACCTGTGGGAGTGGGACTCGCTCAAGGAGC-AGATTAAGGAGCA 1020315
Query 364725 TGGTACTCGCAAC---TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781
|||| ||||||| | ||||| || ||||||||||| || ||| | |||||
Sbjct 1020314 CGGTATTCGCAACAGTTTGCTCGT---CGCCCCCATGCCCACTGCCAGCACTTCCCAGAT 1020258
Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841
||| || ||||| || |||||||| || | || ||| | || || || || ||
Sbjct 1020257 CCTGGGCAACAATGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCT 1020198
Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCT 364901
| | || || || | ||| || || | || ||||||||||| ||| || ||
Sbjct 1020197 TGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGATACTGGCCT 1020138
Query 364902 GTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCC 364961
||| || ||||||||| ||||| || | || |||||| | |||||||||||
Sbjct 1020137 CTGGTCCGATGCTATGAAGAACCGCATCATTGCTGAGAACGGTTCTATCCAGAACATTCC 1020078
Query 364962 AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAAC 365021
|||| | || | ||| | | ||||| || || ||||| || || |||
Sbjct 1020077 CAACATTCCCGCCGACATCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCTCAGCGCCA 1020018
Query 365022 TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGT 365081
|| | | ||| | ||||| || |||||||| || |||| |||||| || ||| |
Sbjct 1020017 CATCGTCCAGATGTCAGCCGACCGTGGTGCTTTCATTGATCAGTCCCAGTCCTTGAACAT 1019958
Query 365082 ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATC 365141
||||| | || || | |||| |||| |||||| ||| || |||||
Sbjct 1019957 CCACATGAAGGATCCCACAATGGGCAAGATTACCAGCATGCACTTCACTGGCTGGAAGCT 1019898
Query 365142 CGGTCTTAAGACAGG 365156
||||| ||||| ||
Sbjct 1019897 TGGTCTCAAGACTGG 1019883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351412402442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |