Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq35 86.0 5e-12
>seq35
Length=1329723
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651
||| ||||| || || || || || || || |||||||| |||| || || || | |||
Sbjct 994081 GTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 994140
Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711
|| || || || || | | ||| || || |||| |||||| ||| | ||| ||
Sbjct 994141 GAAGTCAAAGGGGTTGGAGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGCAGACG 994200
Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770
||| || ||||| || ||||||| ||| || || || ||||||||||||| ||
Sbjct 994201 ATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTG-GCGTTCATGCCCAGCAGAGCAC 994259
Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGAT 104804
||| | ||| | || || || |||| ||||||
Sbjct 994260 AGGGGAGAGCCTCGGTCAAGAACTCTTGCTCGAT 994293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935313580305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |