Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq35 86.0 5e-12 >seq35 Length=1329723 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| ||||| || || || || || || || |||||||| |||| || || || | ||| Sbjct 994081 GTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 994140 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || || || || || | | ||| || || |||| |||||| ||| | ||| || Sbjct 994141 GAAGTCAAAGGGGTTGGAGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGCAGACG 994200 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770 ||| || ||||| || ||||||| ||| || || || ||||||||||||| || Sbjct 994201 ATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTG-GCGTTCATGCCCAGCAGAGCAC 994259 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGAT 104804 ||| | ||| | || || || |||| |||||| Sbjct 994260 AGGGGAGAGCCTCGGTCAAGAACTCTTGCTCGAT 994293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935313580305