Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq35 385 9e-102
seq66 343 3e-89
>seq35
Length=1329723
Score = 385 bits (426), Expect = 9e-102
Identities = 607/856 (71%), Gaps = 20/856 (2%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||| ||||| || ||| |||||||||||| |||||||| |||
Sbjct 994923 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTG 994864
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | || | |||| || |||| |||| ||| ||
Sbjct 994863 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 994805
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||||||||| || ||||| |||||||| ||||| |||||||||| | |
Sbjct 994804 TCACATCCTGGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAGAACCTGGTCGAGCG 994745
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | ||||| || ||||||||||| |||||||| ||
Sbjct 994744 TTTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 994685
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| || ||||||| |||| ||| || ||| |
Sbjct 994684 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATCGACACCTACGTCAAGGAGCA 994628
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| ||| || ||||| ||||| ||||| || || |||||| ||||||||
Sbjct 994627 CAGCCAGCGCAACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATCCGTAAGAAGGC 994568
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
|||||||| |||| |||||| || ||| | | || | || | || || ||
Sbjct 994567 TGACTGGGCCATCAAGTGGATCCAGGACAAGGACTCTTCCTTTGCTCAGCGCCTTGTTGC 994508
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||||
Sbjct 994507 CTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTGGCTCAA 994448
Query 42773 GCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| ||| |||| || ||||| || || |||||||| ||||| |||||| | |||||||
Sbjct 994447 GAAGAGAGGTCTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 994389
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| ||||| | |||||||| ||||| || ||| ||||| | | || || |
Sbjct 994388 GCCTGCACACCGACTTTGCTTGCCTGCTCCACTC---TCACCTGAAGAACCGCGCCAGCA 994332
Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951
||||| |||| | |||||||| || ||||| |||||| | |||||| | ||
Sbjct 994331 AGGAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCAAGAGTTCTTGACCG 994272
Query 42952 AGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010
|| | || ||| ||| | ||| | ||||||||| | ||| ||| ||||||| ||
Sbjct 994271 AGGCTCTCCCCTGTG-CTCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTACATTGAG 994213
Query 43011 TACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTG 43069
| || ||||| | ||| || || | ||| || | | ||||| | |
Sbjct 994212 TTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAG-ATTTACAAGTCCTCCAA 994154
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
|||||| ||||| |||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct 994153 CCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 994094
Query 43130 CGTCGCCGACTACCAG 43145
|||| ||| ||||||
Sbjct 994093 TGTCGGCGAGTACCAG 994078
>seq66
Length=2244893
Score = 343 bits (380), Expect = 3e-89
Identities = 1149/1767 (65%), Gaps = 67/1767 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||||| | || |||| ||| | ||||||||||||||| |||||||| |
Sbjct 1019836 TGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 1019895
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| | || ||||||| || | ||| ||| | |||| |
Sbjct 1019896 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCAT-------TGTGGGA--T 1019946
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||| | ||||||| ||| || | ||| | | || || || |
Sbjct 1019947 CCTT---CATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTG 1020003
Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980
||| || || || |||||| ||||| | | |||||||| | || ||||| ||
Sbjct 1020004 ACATCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGT 1020063
Query 243981 GCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
|||| || | || ||||||| | || || || | | |||| || | |
Sbjct 1020064 CGGCGGG-AATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTC 1020122
Query 244040 ATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCA 244094
|| |||| ||| ||||| | || | || ||| || ||||| | || |
Sbjct 1020123 ATAGCATCGGACCAGAGGCCAGTATCGA-CAAGATCCTTGAGAAGCCAGGGG----TTGA 1020177
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | || || || |||||||||| |||| | || |||||||
Sbjct 1020178 CAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGA 1020237
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214
|| || |||||||||| ||||| | ||||| ||||| |||||||| | || ||||
Sbjct 1020238 AGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCA 1020297
Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
|||||| | | |||||| || || | ||||| || ||| ||||||| |
Sbjct 1020298 AACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGT 1020357
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
| || || | |||| |||||| ||||||||| || | || | | || |
Sbjct 1020358 C--AGTGGGC-------TTGACATCCCACAAGTCAAACTGGAGAATGCCTT--CAGAGGC 1020406
Query 244335 GGCTG--CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGT 244391
|| || |||| | | | | || ||||| ||| || ||| | || | || | | |
Sbjct 1020407 GGGTGATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCC-T 1020465
Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451
||||||| |||| |||||||||||| ||||| |||||||| ||||| || | |
Sbjct 1020466 CGAGGGCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTG 1020525
Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511
| ||| || | | || | ||| |||| || || ||||| || || | || |
Sbjct 1020526 ATTCGAAAGGAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAA 1020585
Query 244512 TGGGTCTGTGTCGCTTGTT---GGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
|||||| ||| || |||| | ||| || || | |||||||| |||| | |
Sbjct 1020586 TGGGTCGGTGGCGGCTGTTACTGTTGCGA---GCCTCCTGAACGGGGTAGTAGTTCACAT 1020642
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | ||||||||| ||| | || | || ||| ||| || |||||
Sbjct 1020643 CGATGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGT 1020702
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTG 244687
| || | | ||| | || || || ||||| | ||| || | |
Sbjct 1020703 CATA-------GCAGCCT------TCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAG 1020749
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|||| ||||||||| || ||||| || | | | ||||| || ||||| |||||||||
Sbjct 1020750 GCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGG 1020809
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
|| || |||||| ||||||| || || ||| |||| ||||||||| ||||||
Sbjct 1020810 TTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTG 1020869
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| ||||| ||||| || ||||| |||||| | |||| | || ||| || | |
Sbjct 1020870 TAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTC 1020929
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| || ||| ||||| |||||||||| |||||| ||||| ||||||
Sbjct 1020930 TGAGCTCGGATAGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCG 1020989
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|| || ||| || || | ||||| ||||| || | |||||||| | | |||
Sbjct 1020990 AATTCTTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTG--GGGCACATCAAAGTCC 1021047
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| || | | || || | || |||||| || || ||||||||||| || |||| |
Sbjct 1021048 AGTCCAAGTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACA 1021107
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|||| | || | ||| ||| ||| |||||| | || || | || |||||||
Sbjct 1021108 GGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGA 1021167
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
| ||| ||||||| ||||| | ||||| || | ||| || || ||||||||||| ||||
Sbjct 1021168 CATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCT 1021227
Query 245166 GGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|||| || || | || | |||||||| || || | || | || ||||| |||
Sbjct 1021228 GGTCGACGTATCTGGC-AGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAG 1021286
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCT 245284
||||||||||| ||||| | |||| | | | || | || | || |||
Sbjct 1021287 GTACCGTTGGTGCCGGCAATGTAAGAGCCCGTAGCACGGATACGGTGGACGTTCAGGCCG 1021346
Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344
| || || || |||||| || | ||| || |||| | ||||| || |||||
Sbjct 1021347 ATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTCGTAGATACCCTCA 1021406
Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG-GGGCTGCA 245403
|||||||| |||||||| | ||| ||||| |||||||||| | ||||| ||| | |
Sbjct 1021407 ATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT-GAGCTTGTGGGGTACC 1021465
Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGT 245463
| |||||| || ||||| ||| ||||||||| | ||| || | || ||| ||
Sbjct 1021466 AGCGTTGAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGT 1021525
Query 245464 CTGGAGCAGAGCGTCGATGTTGTCGCC 245490
|| || | | || |||||||| ||
Sbjct 1021526 CTCAAGGACACGCTCAATGTTGTCTCC 1021552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337653644560
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