Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq66 224 1e-53
seq35 141 1e-28
>seq66
Length=2244893
Score = 224 bits (248), Expect = 1e-53
Identities = 1060/1664 (64%), Gaps = 35/1664 (2%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| || ||| ||| |||| | || ||||||||||| || |||||||| |
Sbjct 1019836 TGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 1019895
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| || | ||||| || | |||| | ||| ||| | ||||
Sbjct 1019896 CAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGT 1019955
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| ||||| ||||| ||||| ||||| ||||| || || | ||| | | |
Sbjct 1019956 GGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGACGA 1020015
Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804
| | ||| ||||| ||||| |||| ||| ||| || || | || || |
Sbjct 1020016 TGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGAATGT 1020075
Query 113805 CCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 113864
|| || ||||| || || | | | ||| | | ||||||| | | ||||
Sbjct 1020076 TGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACC 1020135
Query 113865 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCAC 113921
|||| ||| | | ||||||| |||| || |||||||| ||||| |
Sbjct 1020136 AGAGGCCAGTATCGACAAGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGC 1020192
Query 113922 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981
| || ||| |||| | | ||||| |||| ||||| ||||| ||||| |||||||| |
Sbjct 1020193 CAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCATTGTTGC 1020252
Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041
||| ||| |||| ||| ||| ||||||||||| || | ||| | ||||| || | ||
Sbjct 1020253 CCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGTTGCGAATAC 1020312
Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCC 114099
| | ||| |||| | |||||||| | |||||| | | || | || | | || |
Sbjct 1020313 CGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAG--TGGGCTTGAC 1020370
Query 114100 CTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTA 114159
| ||||| ||||||||||| || |||| ||||| || ||||||| |||| ||| ||
Sbjct 1020371 ATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACTCATA 1020430
Query 114160 TGGGCCCTCAACCTCCGCCA-ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218
|| ||||| | || || | | | || | ||||||||||| ||||| || || ||||
Sbjct 1020431 AGGACCCTCGATCTTGGCAATCTCCATAGAT-GCCTCGAGGGCAGCGTGGTAGATGGTCT 1020489
Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AA 114277
|||| || | |||| | || ||| || || || | || | ||| |
Sbjct 1020490 CAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCGAAAGGAAGAC-GCAGAGCG 1020548
Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337
| || | || || ||||| || ||||| | ||||| || || || | | |||
Sbjct 1020549 AGGAAAGCGTCAGCAAGACCCTGAACACCAACACCAATGGGTCGGTGGCGGCTGTTACTG 1020608
Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397
|| ||||| || ||||| || | ||| |||||| | | || || || |
Sbjct 1020609 TTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACGGACA 1020668
Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 114457
|| ||||| || | || |||||||| | | ||| | | || | | | ||||
Sbjct 1020669 ACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCATAGCAGCCTTCGTTATAGTCGACA 1020728
Query 114458 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 114517
| ||| || || | || |||| || || |||| | ||| || ||| ||||
Sbjct 1020729 AAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGAGTAC 1020788
Query 114518 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577
|| | || || || || | || || || ||||| |||| |||||| || || |
Sbjct 1020789 TCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTC 1020848
Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637
|| ||| || ||||||||||||||||| | || | || ||||| || |||| ||
Sbjct 1020849 TTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCT 1020908
Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCCTCC 114694
|| || | | ||| | | || | ||| | | || | ||| || | ||||||| |
Sbjct 1020909 AGGATGGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCG-ACCCTTG-CCCTCCTTC 1020965
Query 114695 TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCC 114754
|||||||| || || || || || ||||| || | || | || || || ||
Sbjct 1020966 TCGTACTTCTCATACAGAGCCTCGAATTCTTCGCCATAGCAGTCAGCAAGGCCAGG-GCA 1021024
Query 114755 TT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCTTCATGAAGAGG 114811
|| | ||||| | | || ||| | ||| || |||||||||||||||||| ||
Sbjct 1021025 TTCGTTGGGGCACATCAAAGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATGAACAGA 1021082
Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871
|| |||||||||||||| ||| || || || || | ||||| | || || ||
Sbjct 1021083 TCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTC 1021142
Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 114931
|| | || | || || | || ||| |||||||| || || ||||| | || |
Sbjct 1021143 TTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAG 1021202
Query 114932 GACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985
| || | | || ||| |||||| || || || || ||| || || ||
Sbjct 1021203 GCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACT 1021259
Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 115045
|||||||| || |||||||| | || || || || || ||| ||| |
Sbjct 1021260 CGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCCCGTA 1021319
Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105
|| | || | |||| || || || ||||| || ||| ||| || || || ||
Sbjct 1021320 GCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACAT 1021379
Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165
| | ||| || ||||||| || || || ||| |||| | | | ||||||||
Sbjct 1021380 GTCTTTAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCAT 1021439
Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 115209
|||| || | ||| |||||||||||||||||||| ||
Sbjct 1021440 GAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGG 1021483
>seq35
Length=1329723
Score = 141 bits (156), Expect = 1e-28
Identities = 349/521 (67%), Gaps = 9/521 (2%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| || ||||||||||| |||||||| || || |||||| ||| ||
Sbjct 994370 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCA 994429
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| | |||||| | |||||| || | ||| | || |||||||||
Sbjct 994430 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 994489
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225
||||| || || || |||| || |||| ||||||||| | | | |||| | |
Sbjct 994490 CCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGAT 994548
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285
|||||| || ||||| | ||||| || ||| || || | ||||| || || | ||
Sbjct 994549 CCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTGAA 994608
Query 126286 GAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 126344
||| | || | | || | || |||| ||| | || ||||| || || || |
Sbjct 994609 GAGGTAGTTGCGCT-GGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTCT 994667
Query 126345 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 126403
|| ||||| | | ||| || | ||| | ||||||| | || || ||| |||
Sbjct 994668 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 994726
Query 126404 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463
|| ||||| || ||| | | ||||| ||||| || ||||| |||||
Sbjct 994727 TGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCA 994786
Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520
|| || |||||||| | ||||| | || || | ||||||| || | ||||||
Sbjct 994787 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 994846
Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||| |||||||| || ||||| | ||| || || |||||
Sbjct 994847 TCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 994887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352621833480
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