Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq44 102 8e-17
>seq44
Length=3047126
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | |||||| ||||||| |||||||| || || |
Sbjct 758071 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 758130
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| ||||||||||| || || || || || || || || || ||| ||| ||
Sbjct 758131 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 758190
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | |||||| | |||||||| | || | ||||||||||||||||| || ||
Sbjct 758191 TCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCTTGCCGGTCAAAGTCTTGACA 758250
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 758251 AAGATCTGCAT 758261
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || || || ||||||||||| | |||||| ||||
Sbjct 758277 AAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTC 758336
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| || ||| | ||||| ||||||||||||||||| || || || || ||
Sbjct 758337 CTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 758396
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | ||||| | ||||| || | || | |||
Sbjct 758397 CTGGATCTTGGACTTGACGTTGTCAATGGTATCGGATGACTCCACCTCGAGGGTGATGGT 758456
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
||||||||| | ||| || ||||
Sbjct 758457 CTTGCCGGTGAGAGTCTTGACGA 758479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643981831640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |