Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq66 282 4e-71
>seq66
Length=2244893
Score = 282 bits (312), Expect = 4e-71
Identities = 1082/1676 (65%), Gaps = 46/1676 (3%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| ||| || ||||| ||| | ||||||
Sbjct 1021666 AACTACCAATACTTCGGCTTCAAGACACTGGAGCGGTCATATCTCCTGAAGCTTGATGGC 1021607
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||||| || || || | ||||| || || | || || || ||
Sbjct 1021606 AAGATTGTTGAGCGACCACAGCACATGATTATGCGTGTGGCTGTTGGCGTTTGGGGAGAC 1021547
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| | ||| | | | | | |||| ||| | |||| |||
Sbjct 1021546 AACATTGAGCGTGTCCTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCC 1021487
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || ||||| |||||||| || ||||| | ||| |||| || || |||||| ||
Sbjct 1021486 TCTCCCACCCTCTTCAACGCTGGTACCCCACAAGCTCAGCTGTCCTCATGCTTCCTGGTG 1021427
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| |||| |||| ||| || || | ||||| || ||| ||||| | ||
Sbjct 1021426 GACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTAAAGACATGTGCCATGATT 1021367
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCT 94072
|| || || || || ||||| | | |||||| |||| ||||| | ||| || |
Sbjct 1021366 TCCAAGATGGCTGGTGGTATCGGCCTGAACGTCCAC--CGTATCCGTGCTACGGGCTCTT 1021309
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| ||| ||||| || ||||||||||| || |||| ||||| || ||||||||||
Sbjct 1021308 ACATTGCCGGCACCAACGGTACCTCCAACGGTATCATCCCCATGCTTCGAGTCTTCAACA 1021249
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || | ||||| ||||||||||| | | | ||| | || || |||| |
Sbjct 1021248 ACACTGCCAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACC 1021189
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| || || | ||| | ||||| || |||||||||||||| |
Sbjct 1021188 TCGAGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGG 1021129
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | ||| | ||||| ||| |||||||||| | || || || || ||||| |
Sbjct 1021128 AAGAGGTCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGC 1021069
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || ||||| |||| | ||||| | | | || ||||| ||||| || || || | |
Sbjct 1021068 GTGTTGAGAAGAACTTGGACTGGACTTTGATGTGCCCCAACGAATGCCCTGGCCTTGCTG 1021009
Query 94373 ACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
|| | ||| || | || || || |||||| ||||| | |||||||||
Sbjct 1021008 ACTGCTATGG--CGAAGAATTCGAGGCTCTGTATGAGAAGTACGAGAAGGAGGGCAAGGG 1020951
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| ||| ||| ||| |||||||||| | ||| | || | ||| |||||
Sbjct 1020950 TCGCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCCATCCTAGAGGCCCAGACTGAGAC 1020891
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|||| |||| || | | |||||| | |||| |||| ||||||| || ||||
Sbjct 1020890 TGGTAACCCCTTTATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCT 1020831
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| ||| ||||| || || ||||| ||||| || ||||| || | || |||||
Sbjct 1020830 GGGAACCATCCGAAGCTCCAACCTCTGCACTGAGATCGTTGAGTACTCTGCCCCTGACGA 1020771
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| | ||||| || ||| ||| ||| | || | | || || ||| ||| |
Sbjct 1020770 GGTCGCTGTCTGCAACTTGGCCTCTTTGGCTCTCCCTGCCTTTGT-CGA-----CTATA- 1020718
Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACTTCGCGGGAAGGATGGTCTTGA 94729
| | ||| | | || | || ||||| || || | | || | ||| |
Sbjct 1020717 -ACGAAGGCTGC-TATGACTTTAAGAAGCTTCACGATGTTACCAAGGTGG-TTGTCCGTA 1020661
Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789
|||| ||| | | ||||| ||||| ||||||||| | |||||| ||| |||
Sbjct 1020660 ACCTCAACCGCATCATCGATGTGAACTACTACCCCGTTCAGGAGGCTCGCAACAGTAACA 1020601
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| || ||||| || | || || |||||| | || ||||| | | |||
Sbjct 1020600 GCCGCCACCGACCCATTGGTGTTGGTGTTCAGGGTCTTGCTGACGCTTTCCTCGCTCTGC 1020541
Query 94850 GTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908
|||| || | ||| || ||| || ||| | ||||| | | || || || | |||
Sbjct 1020540 GTCTTCCTTTCGAATCACCCGAAGCTCGCGAG-TTGAACAAGCAAATCTTTGAGACCATC 1020482
Query 94909 TATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACACGA 94967
|| ||| ||| | | ||| | | ||| | |||| || || || | ||
Sbjct 1020481 TACCACGCTGCCCTCGAGGCATCTATGGAGATTGCCAAGAT----CGAGGGTCCTTATGA 1020426
Query 94968 ATCGTTCCGCGGATCGC---CCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
|| ||| ||||| | ||| ||| |||||| | ||||| ||| | |||| |||
Sbjct 1020425 GTCATTCAAGGGATCACCCGCCTCTGAA---GGCATTCTCCAGTTTGACTTGTGGGATGT 1020369
Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGT 95082
|||||| | | |||| || ||||| |||| | | || || ||| | ||||||
Sbjct 1020368 CAAGCCCACTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TTAAGGAGCACGGT 1020311
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
| ||| |||| || |||||||||||||| ||| ||| | |||||||| |||
Sbjct 1020310 ATTCGCAACAGTTTGCTCGTCGCCCCCATGCCCACTGCCAGCACTTCCCAGATCCTGGGC 1020251
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
||||| || | ||||| |||| |||||||||| | ||| | | || || || || ||
Sbjct 1020250 AACAATGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGC 1020191
Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGG 95261
|| |||| || ||||| || || | || | || || || || | |||
Sbjct 1020190 GAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGATACT-GGCCTCTGGTC 1020132
Query 95262 TGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317
|| | ||||||| | |||| | ||||| || |||||||||| ||
Sbjct 1020131 CGATGCTATGAAGAACCGCATCATTGCT----GAGAACGGTTCTATCCAGAACATTCCCA 1020076
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| || || | ||||||||||| || |||||||| || ||||||||| | ||||||
Sbjct 1020075 ACATTCCCGCCGACATCAAGGCCCTGTACAAGACTGTTTGGGAGATCTCTCAGCGC 1020020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722389890760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |