Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq35 226 5e-54
>seq35
Length=1329723
Score = 226 bits (250), Expect = 5e-54
Identities = 390/564 (69%), Gaps = 2/564 (0%)
Strand=Plus/Plus
Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976
|| ||||| ||||||||| |||||| |||||||| |||||||||| ||||||||| | |
Sbjct 994361 AGCAGGCAAGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAG 994420
Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036
| ||||| ||||||| || | | |||||||| || |||| ||||| || |||||
Sbjct 994421 GTCAGGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTG 994480
Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096
|| ||||| ||||| ||||| ||||| || || || | || | |||| || | || ||
Sbjct 994481 AAGAAGATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTG 994540
Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156
|| ||| ||||| | ||||||| ||||||||||| |||||| || ||| ||| | |
Sbjct 994541 TCCTGGATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATG 994600
Query 160157 GCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAG 160216
||||| || | || ||| | ||||||| || | || ||| |||
Sbjct 994601 GCGTTGAAGAGGTAGTTGCGCTGGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAG 994660
Query 160217 TACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCC 160276
|| | || | ||| | || || || ||||| || |||||| || |||||
Sbjct 994661 TAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCG 994720
Query 160277 AGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCG 160336
| ||| ||||| |||| | | |||| || | || || | ||||||| |
Sbjct 994721 GGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAG 994780
Query 160337 GCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTT 160396
|| |||||||| |||| | |||||||||||| | ||||||| | ||| || | ||
Sbjct 994781 GCAGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTG 994840
Query 160397 TCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTG 160455
| ||||| ||| || || | || || ||||| |||||| ||| |||| || |||||
Sbjct 994841 TTCCAGTCGTG-CAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTC 994899
Query 160456 AGCAGTTTTGTACATGGCCCAGAT 160479
|| |||||||||| ||||||
Sbjct 994900 GGCCTTTTTGTACATTTGCCAGAT 994923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153897933360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |