Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq66 286 4e-72
seq35 149 8e-31
seq43 120 4e-22
seq1 91.5 2e-13
>seq66
Length=2244893
Score = 286 bits (316), Expect = 4e-72
Identities = 973/1494 (65%), Gaps = 29/1494 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| | ||||| || || | || | || || | ||||| |||
Sbjct 1021591 CCACAGCACATGATTATGCGTGTGGCTGTTGGCGTTTGGGGAGACAACATTGAGCGTGTC 1021532
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||||||| || |||||| | | || | ||| || | || |||||||||
Sbjct 1021531 CTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCCTCTCCCACCCTCTTC 1021472
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||||||||| ||| | | || ||||| || ||||| | | | ||||| ||
Sbjct 1021471 AACGCTGGTACCCCACAAGCTCAGCTGTCCTCATGCTTCCTGGTGGACATGAAGGACGAC 1021412
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | || || |||| |||||| | ||||||| || || ||| |||||||
Sbjct 1021411 AGCATTGAGGGTATCTACGACACTCTAAAGACATGTGCCATGATTTCCAAGATGGCTGGT 1021352
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911
|||||||| || || |||| | || | || | ||| ||| || || ||
Sbjct 1021351 GGTATCGGCCTGAACGTCCACCGTATCCGTGCTACGGGCTCTTACATTGCCGGCACCAAC 1021292
Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971
||| || | ||||| || || |||||||| || || ||| ||| || | || ||
Sbjct 1021291 GGTACCTCCAACGGTATCATCCCCATGCTTCGAGTCTTCAACAACACTGCCAGATACGTC 1021232
Query 111972 AACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028
|||| | ||| ||| || | | || |||| || ||||| ||||||||
Sbjct 1021231 GACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACCTCGAGCCTTGGCACGCC 1021172
Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGC 112088
||| || | ||||||||||| | || ||||| || | || |||| || |||
Sbjct 1021171 GATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGTGCCCGT 1021112
Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG--TG 112146
|| || ||| |||||||||||| || ||||| ||||||||| | |||||| ||| ||
Sbjct 1021111 GACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGTGTTGAGAAGAACTTG 1021052
Query 112147 GCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGA 112204
| | ||| || | | || || || || || || || || | || ||| ||| ||
Sbjct 1021051 G--ACTGGACTTTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTATGGC-GA 1020996
Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTG 112262
|| || || || || || ||||||||| ||| | | | | | | || ||| |
Sbjct 1020995 AGAATTCGAGGCTCTGTATGAGAAGTACGAG-AAGGAGGGCAAGGGTC-GCAAGACTATC 1020938
Query 112263 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321
| |||| | || | ||||| | | || || || | || || |||||||||| || |
Sbjct 1020937 CGAGCT-CAGAAGCTGTGGTACTCCATCCTAGAGGCCCAGACTGAGACTGGTAACCCCTT 1020879
Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381
|||||||||||| || ||||| |||| ||||| || || ||||| |||| |||
Sbjct 1020878 TATGCTTTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCCG 1020819
Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441
|| ||||||||||| || || ||| | || | | | | || ||| ||||| ||
Sbjct 1020818 AAGCTCCAACCTCTGCACTGAGATCGTTGAGTACTCTGCCCCTGACGAGGTCGCTGTCTG 1020759
Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGAT 112499
||| | || || | |||||||| | ||| || | | | || ||| | | |||
Sbjct 1020758 CAACTTGGCCTCTTTGGCTCTCCCTGCCTTTGTCGA-CTATA-ACGAAGGCTGCTATGAC 1020701
Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559
| | | || || ||||| ||||| || || ||||| ||| | | || |||
Sbjct 1020700 TTTAAGAAGCTTCACGATGTTACCAAGGTGGTTGTCCGTAACCTCAACCGCATCATCGAT 1020641
Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619
|| | ||||||||| || ||||| || ||| | | ||||| || ||||||
Sbjct 1020640 GTGAACTACTACCCCGTTCAGGAGGCTCGCAACAGTAACAGCCGCCACCGACCCATTGGT 1020581
Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGA 112678
| ||||| || ||||| || || | ||| | || || || | | || || ||
Sbjct 1020580 GTTGGTGTTCAGGGTCTTGCTGACGCTTTCCTCGCTCTG-CGTCTTCCTTTCGAATCACC 1020522
Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC 112738
|||||| || | || || || |||||||| || || ||||| || || |||||
Sbjct 1020521 CGAAGCTCGCGAGTTGAACAAGCAAATCTTTGAGACCATCTACCACGCTGCCCTCGAGGC 1020462
Query 112739 GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 112798
| |||| | || || | || ||||| ||||| | || |||| || || || ||
Sbjct 1020461 ATCTATGGAGATTGCCAAGATCGAGGGTCCTTATGAGTCATTCAAGGGATCACCCGCCTC 1020402
Query 112799 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGA 112858
|||| | || || ||||| ||||||| | || ||| | | || |||||
Sbjct 1020401 TGAAGGCATTCTCCAGTTTGACTTGTGGGATGTCAAGCCCACTGACCTGTGGGAGTGGGA 1020342
Query 112859 CGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAAT 112918
| | |||||||| | || |||||| | ||| |||| |||||| | | | || || ||
Sbjct 1020341 CTCGCTCAAGGAGCAGATTAAGGAGCACGGTATTCGCAACAGTTTGCTCGTCGCCCCCAT 1020282
Query 112919 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 112978
||| || ||| ||| | || ||| |||| || ||||||||||| || |||||||| |
Sbjct 1020281 GCCCACTGCCAGCACTTCCCAGATCCTGGGCAACAATGAATGCTTCGAGCCCTACACCTC 1020222
Query 112979 GAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATCT 113035
|||||||| | | || | ||| || || ||||| | ||||||| | || |||
Sbjct 1020221 CAACATCTACCAGCGACGTGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCT 1020162
Query 113036 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089
| |||| || || | ||| ||||||||| | | ||||||| | | |||
Sbjct 1020161 CAAGGAT---CTTGTCGATACTGGCCTCTGGTCCGATGCTATGAAGAACCGCAT 1020111
>seq35
Length=1329723
Score = 149 bits (164), Expect = 8e-31
Identities = 353/523 (67%), Gaps = 13/523 (2%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || |||||| | ||||| || |||||| || |||| ||||| | | | ||
Sbjct 994887 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 994828
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| | || ||| | ||||| |||||||||| |||||||||| ||||| || |||
Sbjct 994827 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCCGACGGCATT 994768
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| | | || | ||||| || |||| | || || |||
Sbjct 994767 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCC-GAGGCTCGATG 994709
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | || || | |||| ||| | | | || ||||| ||| ||||
Sbjct 994708 CTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 994650
Query 102052 TAGACAAGTATATTAAGGATGGTGCTG--AGAAGAAGCAGCTCTTTGAAGCCATCCAAAC 102109
| |||| || | ||||| | | | || || | ||||| | ||||| | ||
Sbjct 994649 TCGACACCTACGTCAAGGA--GCACAGCCAGCGCAACTACCTCTTCAACGCCATTGAGAC 994592
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||| || || | ||||| || || ||||| || |||||| | | |||| | | |
Sbjct 994591 CATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAGGACAAGGACTC 994532
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
|||||||||| |||| || | || ||||| || ||||||||||||||| ||
Sbjct 994531 -TTCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGAG 994473
Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
|||| | | || | |||||||||||| ||||||||||||| || || ||||||||
Sbjct 994472 CCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCA 994413
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||| ||||||||||||||||| || ||| || |||||
Sbjct 994412 ACGAGCTCATCTCTCGTGACGAGGGCCTGCACACCGACTTTGC 994370
>seq43
Length=1687706
Score = 120 bits (132), Expect = 4e-22
Identities = 281/415 (68%), Gaps = 22/415 (5%)
Strand=Plus/Minus
Query 15888 TCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCG 15947
|||||||| || || || | ||||| | ||| | || |||| | ||||| || ||||
Sbjct 759617 TCAAAGCGGCCGGGACGCATCAGCGCCTTATCCAAGACATCAGCACGATTGGTACCGGCC 759558
Query 15948 ATGACAACAATACCTGTT-TCGT-TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAA 16005
| |||||| | |||||| ||| | | || || ||||| ||||| | || ||||||||
Sbjct 759557 AAGACAACGA--CCTGTTCTCGAGTGTTGAATCCGTCCATTTCTGTAAGAATCTGGTTAA 759500
Query 16006 TAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCC--C 16061
|| || ||||||||||| ||| | || ||| || || || || || |
Sbjct 759499 GGGTAGCCTCGCGTTCATCATTTCCGCCGA-AT----CCACGACCGCTTTCCTGTCGAGC 759445
Query 16062 ACGGC-------ATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114
||||| ||| || || |||||||||| |||||| || || | || | |
Sbjct 759444 ACGGCCGATGGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCGTTCTTTCGGCCTTC 759385
Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174
|||| || || ||||| || | ||||| |||||||||||||||||||| | |
Sbjct 759384 GGCAAACAGGTCTCGTACTCGAGAAGGACCCACGCCAACAAACATCTCCACAAACTCAGA 759325
Query 16175 GGCG-GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233
|| || | | ||| ||||| ||| || || ||| | || |||||||||||
Sbjct 759324 ACCGCTTACGCT-AAAGAAAGGGACGCCAGACTCTCCAGCAGTAGCCTTGGCGAGAAGAG 759266
Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||| || || || || ||| | ||| | ||| ||||| ||||||||||| ||
Sbjct 759265 TCTTTCCTGTTCCCGGGGGACCAGAGAGAATGGCGCCTCGAGGAATCTTGGCACC 759211
>seq1
Length=3480556
Score = 91.5 bits (100), Expect = 2e-13
Identities = 199/296 (67%), Gaps = 8/296 (3%)
Strand=Plus/Plus
Query 176036 AGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAG 176095
|| || | |||||| | ||| | ||||| || | |||||||||||||| |||| ||
Sbjct 2613713 AGTCGAGAACCAAAGTTACCGCTGGGCTCGAGGACGTTGATATTGTTTGAGCCCACAAAG 2613772
Query 176096 TCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTC 176155
|| | ||||| |||||||| | | || |||| || ||||||||||| ||| ||
Sbjct 2613773 TCTTGGGCCAATCCAACAATCGTCTGCTGCAGCGAGATGTCGCCGTGGTGGTAAGCAGTC 2613832
Query 176156 TTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGA----GATTCTT 176211
| | ||| | | |||| || | | |||| | |||||||||| | ||| |
Sbjct 2613833 AGTCCAGAGACGTAACCAGCCAGCTCCACAACTT---TTTCATCCTTGACCACGTTTC-T 2613888
Query 176212 GTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGC 176271
| |||||| ||||||| ||||| ||||| |||||| || ||||| ||| |
Sbjct 2613889 CTTGAAACAGGCGTACAGCACCTTTCGTTGACCAGGCTTCAGTCCATCAATCATTGACGG 2613948
Query 176272 GATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGTGTACAAAGT 176327
|| || | | ||||||| |||||| | ||| ||||||| |||||||
Sbjct 2613949 AATGGATCTTATGTTATCCGCCATACTGAACAGAATGAGCTCCTTGTTCACAAAGT 2614004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741383534320
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