Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq66 232 8e-56 seq35 95.1 1e-14 >seq66 Length=2244893 Score = 232 bits (256), Expect = 8e-56 Identities = 1026/1601 (64%), Gaps = 55/1601 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||||| |||||||| ||||| |||||| || || | ||| | || ||| Sbjct 1019960 GTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGACGATGTG 1020019 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 || || ||||| ||||||||||||| |||||| || ||||||||| Sbjct 1020020 GCGCTGAGAGATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGAATGTTGGG 1020079 Query 109620 GATGTTTTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCA 109676 ||||| || ||||| || |||| | | || | | |||||| | | ||||| Sbjct 1020080 AATGTTCTGGATAGAACCGTTCTCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCA 1020136 Query 109677 GAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGC 109736 ||| || | ||||| | | ||| |||||| || || || ||||| Sbjct 1020137 GAGGCCAGTATCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGC 1020196 Query 109737 AAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAG 109796 ||| ||||| |||||||||| | |||||||| ||||| || ||||||||||| || Sbjct 1020197 AAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCATTGTTGCCCAG 1020256 Query 109797 GATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTT 109856 ||| || | |||| || ||||||||||| || | ||| | |||||| || | ||| | Sbjct 1020257 GATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCGACGAGCAAACTGTTGCGAATACCGTG 1020316 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT---CTC 109913 | ||| | | |||| | | |||||| || |||| | | ||| || Sbjct 1020317 CTCCTTAATCTGCTCCTTGAGCGAGTCCCACTC-------CCAC--AGGTCAGTGGGCTT 1020367 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 ||||||||| || || || | || |||| || || || |||||||| ||| Sbjct 1020368 GACATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACTC 1020427 Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033 || | ||||| | || ||| | ||| || ||||| || || || || || || || Sbjct 1020428 ATAAGGACCCTCGATCTTGGCAATCTCCATAGATGCCTCGAGGGCAGCGTGGTAGATGGT 1020487 Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAA 110092 |||||| || || |||| ||||| || | ||||| ||||||| || | Sbjct 1020488 CTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTGATTCGAAAGGAAGACGCAGAGC 1020547 Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152 || ||| | || || |||||||||||||| | ||||||||| || || ||||| Sbjct 1020548 GAGGAAA-GCGTCAGCAAGACCCTGAACACCAACACCAATGGGTCGGTGGCGGCTGTTAC 1020606 Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 | ||||| | |||||||| |||| ||||||| || ||||| || Sbjct 1020607 TGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACGGA 1020666 Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGT---CGTAATCGAACGTTTTCGTCTCCTTAT 110269 || ||| || | || || || || | || || | | | |||| | | | Sbjct 1020667 CAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCATAGCA-GCCTTCG--TTATAGT 1020723 Query 110270 TGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGG 110329 |||| | |||||||| | ||| || | ||||| |||| |||||| | | | Sbjct 1020724 CGACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAG 1020783 Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 ||| || | || || || || | |||||| || ||| |||| ||||||||| | Sbjct 1020784 AGTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGT 1020843 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | ||| |||||| |||||||| || ||||| | ||| ||||||| || ||||| | Sbjct 1020844 TGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGG 1020903 Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTT 110506 || || |||| | ||| | | || | || ||| || ||||| | | || | Sbjct 1020904 CCTCTAGGATGGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCG--ACCCTTGCCCT 1020960 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 ||| ||||||||| |||| |||| ||||| | || || |||| ||| || Sbjct 1020961 CCTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTCGCCATAGCAGTCAGCAAG-GCCA 1021019 Query 110567 TCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCA--CCCTCCTCAACCCTCTTCATGA 110623 || || || ||| || | | | ||| |||| || |||||| | |||||||| Sbjct 1021020 GGGCATTCGTTGGGGCACATCAAAGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATGA 1021077 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 |||| ||||| ||||| | || ||| ||||||||| ||| ||||||| | || | Sbjct 1021078 ACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGT 1021137 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| ||| || || | || || | || ||| | |||||| || ||||| |||| | Sbjct 1021138 GGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGG 1021197 Query 110744 CGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | || || | | || || |||||| || || | || ||| |||| Sbjct 1021198 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGA 1021254 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | ||||| || || || || | ||| ||| || || || ||| || Sbjct 1021255 AGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGC 1021314 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | ||||| || ||||| | || || |||||||| ||| ||| ||| | Sbjct 1021315 CCGTAGCACGGATACGGTGGACGTTCAGGCCGATACCACCAGCCATCTTGGAAATCATGG 1021374 Query 110918 CACA-CTCTGT-GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975 |||| ||| | |||||| | || ||||| ||||| || |||| || | | || Sbjct 1021375 CACATGTCTTTAGAGTGT--CGTAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAG 1021432 Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| || |||| ||||| | || || || || |||||||| || || | ||||| Sbjct 1021433 GAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATG 1021492 Query 111036 AATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 | | ||| ||| |||||| || |||||| || || Sbjct 1021493 --GGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAG 1021531 >seq35 Length=1329723 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| ||| Sbjct 994382 TGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCT 994441 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 || ||||| ||||| ||||||| ||| ||| |||||||| ||||| || Sbjct 994442 CTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCA 994501 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683 || || || | || |||| ||| ||||| ||| |||||| || |||||||| || Sbjct 994502 GCAAAGGCAACAAGGCGCTGAGC-AAAGGAAGAGTCCTTGTCCTGGATCCACTTGATGGC 994560 Query 119684 CCAGTTGGCCTT 119695 ||||| ||||| Sbjct 994561 CCAGTCAGCCTT 994572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975035551800