Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq66 255 7e-63
seq35 104 3e-17
>seq66
Length=2244893
Score = 255 bits (282), Expect = 7e-63
Identities = 978/1502 (65%), Gaps = 43/1502 (3%)
Strand=Plus/Plus
Query 105833 ATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892
||| | | ||||||| | | |||||| || ||| | | ||||| |||| ||
Sbjct 1020111 ATGCGGTTCTTCATAGCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAGAAGCCAG 1020170
Query 105893 TTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAG 105952
|||||||| | ||||| || || ||| | || | | |||||||| | ||||||
Sbjct 1020171 GGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAG 1020230
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012
|| || ||||||||||| || |||| ||| || | ||| ||| || ||||| || ||
Sbjct 1020231 GGCTCGAAGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGCG 1020290
Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT-- 106070
| | | |||||| |||| ||| | ||||| || | |||||||| ||||| |
Sbjct 1020291 ACGAGCAAACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCGAGTCCCACTCC 1020350
Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130
| || | || | || || | | ||||||| ||||| || || | |||| || | ||
Sbjct 1020351 CACAGGTCAG-TGGGCTTGA-CATCCCACAAGTCAAACTGGAGAATGCCTTCAGAGGCGG 1020408
Query 106131 GAGAACCCTCAAATGTCTCAT-AGGAACCTTGGGCTTCAGCCAA--TTCACAGCTCGCCT 106187
| || |||| |||| ||||| |||| ||| | ||| | ||| | || || | ||||
Sbjct 1020409 GTGATCCCTTGAATGACTCATAAGGACCCTCGATCTT--GGCAATCTCCATAGAT-GCCT 1020465
Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247
| |||| ||||| || ||||| |||||||| | |||| ||| ||||| ||
Sbjct 1020466 CGAGGGCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCTTCGGGTG 1020525
Query 106248 AATCAAATGCGTAGCGGCACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306
| || || | | || ||| | | || | || || ||||| |||||||| | ||||
Sbjct 1020526 ATTCGAAAG-GAAGACGCAGAGCGAGGAAAGCGTCAGCAAGACCCTGAACACCAACACCA 1020584
Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366
|| |||| ||| || | ||| || || || || |||||| || | || ||
Sbjct 1020585 ATGGGTCGGTGGCGGCTGTTACTGTTGCGAGCCTCCTGAACGGGGTAGTAGTTCACATCG 1020644
Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426
|||| ||||| || || | ||| | ||| || | || ||||| || | | | |||
Sbjct 1020645 ATGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCTTAAAGTCA 1020704
Query 106427 AAAGTGCGAGTC-TCTTCA---TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 106482
| || || | || | | | |||| | || || || | || ||||| |||||
Sbjct 1020705 TA---GC-AGCCTTCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAGGCCAAGTTGCA 1020760
Query 106483 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTT 106542
||||| ||| || | | |||||| | || || || || | |||||| ||
Sbjct 1020761 GACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGTTGGAGCTTCG 1020820
Query 106543 AATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTA 106602
|| || |||| ||||| ||||| ||||| |||||| ||||||||||| ||||| |
Sbjct 1020821 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAAAGCATAAA 1020880
Query 106603 GGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTA 106661
||| | || ||||| ||||| | || || || | | ||||| | || | ||| | |
Sbjct 1020881 GGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTCTG-AGCTCGGA 1020939
Query 106662 CAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 106720
| | | | ||| | |||||| ||||||||| || || || || || || ||
Sbjct 1020940 TAGTCTTG-CGACCCTTGCCCTCCTTCTCGTACTTCTCATACAGAGCCTCGAATTCTTC- 1020997
Query 106721 CCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCA- 106777
||| || ||| | || || || || || || || || | | || ||| | |||
Sbjct 1020998 GCCATAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATCAAAGTCCA--GTCCAA 1021054
Query 106778 -CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC- 106835
|| |||||| ||||||||||| || || || ||||| || | || || || |
Sbjct 1021055 GTTCTTCTCAACACGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACG 1021114
Query 106836 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 106895
||| || ||||||| | || ||||| || | ||||||||||| | || ||| |
Sbjct 1021115 GGCACGGA-CCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGG 1021173
Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTT 106951
||||||| ||||| || |||| || | | || | | | | ||| | || |
Sbjct 1021174 CGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTG-CCACCCTGGTCG 1021232
Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011
|| || | || ||| ||| || || |||||||| || || ||||| | || |||
Sbjct 1021233 ACGTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCGTTGGAGGTACCG 1021292
Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
|| || || ||| ||| | || | | | |||| || || || |||||
Sbjct 1021293 TTGGTGCCGGCAATGTAAGAGCCCGTAGCACGGATACGGTGGACGTTCAGGCCGATACCA 1021352
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
|||||| ||| || || ||||| | | ||||| | |||||||| | || |
Sbjct 1021353 CCAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTCGTAGATACCCTCAATGCTG 1021412
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191
|| ||||| || | | |||||||| ||||| ||| | | ||| |||||||| |||
Sbjct 1021413 TCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGAGCTTGTGGGGTACCAGCGTTG 1021472
Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCA 107249
|||||||| || | || || | || | | || |||||| || ||||||||| |
Sbjct 1021473 AAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCT--GGACATGAGGTGGTATGTCTCAA 1021530
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
|||| ||||||| || || | ||| | ||||||||||||| ||||| || |
Sbjct 1021531 GGACACGCTCAATGTTGTCTCCCCAAACGCCAACAGCCACACGCATAATCATGTGCTGTG 1021590
Query 107310 GT 107311
||
Sbjct 1021591 GT 1021592
>seq35
Length=1329723
Score = 104 bits (114), Expect = 3e-17
Identities = 343/522 (66%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| || ||||| || || || || || || || |||||| |||||
Sbjct 994370 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCA 994429
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||||||||| | |||||| | ||| | || | | || | ||| ||||||||||
Sbjct 994430 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 994489
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452
||||| || ||||| |||| |||||||| || ||||| ||| | |||| | |
Sbjct 994490 CCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGA-AGAGTCCTTGTCCTGGAT 994548
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512
||| || || ||||| | |||||||| || || || | || | ||||| | ||
Sbjct 994549 CCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTGAA 994608
Query 117513 TAACT-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 117571
| | | | | | | | ||||| | ||| |||| || | || || || |
Sbjct 994609 GAGGTAGTTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTCT 994667
Query 117572 CGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATC 117630
|| || | | | ||| ||| | || | ||||||| | || || ||| |||
Sbjct 994668 CGGAGTGGATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGAGCCTCGGGGATC 994726
Query 117631 TGCACTTCATCCGC-AAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 117689
|| || || |||| ||| | | ||||| ||||| || ||||| ||||
Sbjct 994727 TGAACCTC-GCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGC 994785
Query 117690 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 117746
|||||| |||||||||| ||||| | ||| || | || |||| || | |||||
Sbjct 994786 AAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCA 994845
Query 117747 GTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 994846 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 994887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979833906440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |