Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq24 89.7 4e-13
>seq24
Length=1542676
Score = 89.7 bits (98), Expect = 4e-13
Identities = 253/384 (66%), Gaps = 16/384 (4%)
Strand=Plus/Minus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
|||| || || || ||||||||| ||||| || |||||||| |||| | ||| |
Sbjct 36798 TGTGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTTGGGTTCCATGCGCTGAGGATCA 36739
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCC------TGATGAGGTCCACGGCGTTTTGCAGCTGAT 30121
| | | ||| | ||| |||| | || || | | |||| |||||| |
Sbjct 36738 TTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATGATCTCGGC------CAGCTGGT 36685
Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181
| || ||| | || | |||||||| || || ||||| || || |||| ||
Sbjct 36684 CGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACATAGTCTGCGCCAAAGTGCCGCC 36625
Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TG 30240
||||||| ||||| || || |||||||| || | || | ||| || |||| | ||
Sbjct 36624 ACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTGA-GCCCGACGCTG 36566
Query 30241 TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCT 30300
|| | || || | ||| |||||| ||||||||||||| || ||| ||| ||| |
Sbjct 36565 TCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACGTCGCTGAGGGCG 36506
Query 30301 TTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAA 30359
|||| ||| ||||| || |||||| || ||||| | | |||||| ||
Sbjct 36505 GTGGACGAGGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCGCGGAGGAA 36447
Query 30360 GACCCTCTTGGTCGTGAGGAGGGG 30383
||| | |||||| ||||| |||||
Sbjct 36446 GACTCGCTTGGTGGTGAGCAGGGG 36423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616947616463
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |