Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq66 313 5e-80
seq35 221 2e-52
>seq66
Length=2244893
Score = 313 bits (346), Expect = 5e-80
Identities = 1145/1758 (65%), Gaps = 86/1758 (5%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||| ||||||| ||| || || ||||||||||| |||||
Sbjct 1019832 ACTGTGAACTGGATAGGTGCAGCCGCAGCCTGGGTACGCAGGTAGTACATGCCAGTCTTG 1019891
Query 212613 AGGCC---CTTGCCCCAGCC-GTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| ||| | |||||| |||| | | ||| | |||
Sbjct 1019892 AGACCAAGCTT---CCAGCCAGTGAA-GTGCAT-GCTGGTAAT--CTTGCCC-----ATT 1019939
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
||| ||||| || || | ||||| |||||| ||| || ||||| | |
Sbjct 1019940 GTGGG-ATCCTT------CATGTGGATGTTCAAGGACTGGGACTGATCAATGAAAGCACC 1019992
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || | ||| | | ||| | | ||| |||| |||||| || |||||| | |
Sbjct 1019993 ACGGTCGGCTGACATCTGGACGATGTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAG 1020052
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| ||| | || | | ||| |||||||| | ||| || | | ||| |
Sbjct 1020053 GGCCTTGATGTCGGCGGGAATGTTGGGAATGTTCTGGATAGAACCGTTCTCAGCAATGAT 1020112
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | ||| | ||| ||||||||| | | || ||||| ||
Sbjct 1020113 GCGGTTCTT---CATAGCATCGGACCAGAGGCCAGTATCGACAAGATCCTTGAGAAGCCA 1020169
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | || || | | |||||| | ||| || |||||
Sbjct 1020170 GGGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTA 1020229
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||||| || || ||||| ||||| ||||| | ||||||||| ||||||||||| ||
Sbjct 1020230 GGGCTCGAAGCATTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTGGGCATGGGGGC 1020289
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
|| || | |||||| | | |||||||| || | | ||| ||||
Sbjct 1020290 GACGAGCAAACTGTTGCGAATACCGTGCTCCTTAATCTGCTCCTTGAGCG------AGTC 1020343
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| || ||| |||||| | ||| || | ||||| ||||||||| | |||||||
Sbjct 1020344 CCA-CTCCCA--CAGGTCAGTGGGCTTGACATCCCACAAGTCAAACTGGAGAATGCCTT- 1020399
Query 213146 GCTCACGGGGCTG--CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
| | | || || |||| | | || || || || | |||||| | |||
Sbjct 1020400 -CAGAGGCGGGTGATCCCTTGAATGACTCATAAGGACCCTCGATCTTGGCAATCTCCATA 1020458
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| |||| |||||||||| ||||||||| ||||| || | | |||| | || ||
Sbjct 1020459 GATGCCTCGAGGGCAGCGTGGTAGATGGTCTCAAAGATTTGCTTGTTCAACTCGCGAGCT 1020518
Query 213264 TCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322
|| || || ||| || | || ||| |||| | ||||| || ||||| || ||
Sbjct 1020519 TCGGGTGATTCGAAAGGAAGACGCAGAGCGA-GGAAAGCGTCAGCAAGACCCTGAACACC 1020577
Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381
| || ||||||| ||| | |||| ||| |||| ||||| | |||||| |||
Sbjct 1020578 AACACCAATGGGTCGGTGGCGGCTGTTACTGTTGCGAGC-CTCCTGAACGGGGTAGTAGT 1020636
Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441
| |||||||| ||||||||| ||| |||| ||||| |||| | || | ||
Sbjct 1020637 TCACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTGGTAACATCGTGAAGCTTCT 1020696
Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGG 213495
| || | |||| || || | ||||| |||| || || | ||
Sbjct 1020697 ------TAAAGTCATAGCAGCCTTCGTTATAGTCGACAAAGGCAGGGAGAGCCAAAGAGG 1020750
Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555
||| |||||| || || ||||| | || | | | |||||| | |||||| ||||| ||||
Sbjct 1020751 CCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGAGTACTCAACGATCTCAGTGCAGAGGT 1020810
Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTG 213614
|| || ||||||||| |||||||||| ||||| ||| ||| | |||| |||||||
Sbjct 1020811 TGGAGCTTCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGGCATCCTTG 1020869
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674
|| ||||| ||||| || ||||| ||||| | | || || | ||| || | |
Sbjct 1020870 TAAAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCTAGGATGGAGTACCACAGCTTC 1020929
Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCG 213734
|| || | | | ||| | | | | |||||||| || || || |
Sbjct 1020930 -TGAGCTCGGATAGTCTTGCGACCCTTGCCCTCCTT--CTCGTACTTCTCATACAGAGCC 1020986
Query 213735 TTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACATGA 213789
| |||||| | ||| || | ||| || | || |||| || || || ||||| |
Sbjct 1020987 TCGAATTCTTCGCCATAG---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCACATCA 1021041
Query 213790 GGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848
|||||||| || | |||| || | || ||||||||| || |||| ||| || |||
Sbjct 1021042 AAGTCCAGTCCAAGTTCTTCTCA-ACACGCTTCATGAACAGATCAGGGATCCAGAGAGCG 1021100
Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||||||||| | || | ||| ||| || ||| ||||| || || || ||
Sbjct 1021101 AGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAAC 1021160
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965
||||||| || |||||||| ||||| | ||||||||||||||| || | || | |||
Sbjct 1021161 TCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTG 1021220
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| |||||||| || ||||| ||||||||| || || | ||| | | |||
Sbjct 1021221 CCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGAAGCATGGGGATGATACCG 1021280
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATG 214082
||||| |||||||| || || || || ||||| | || | | ||| | | |
Sbjct 1021281 TTGGAGGTACCGTTGGTGCCGGCAATGTAAGAGCCCGTAGCACGGATACGGTGG---ACG 1021337
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
|| || || ||||| || |||||| |||||||| || | | | ||| || |
Sbjct 1021338 TTCAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTTAGAGTGTCGTAG 1021397
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202
|| || | |||||||| || | | || || || |||||| || |||| | || ||
Sbjct 1021398 ATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT-GAGCTTG 1021456
Query 214203 -GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261
| | |||| |||||| || ||||| ||||||| | | || ||| | || | |||
Sbjct 1021457 TGGGGTACCAGCGTTGAAGAGGGTGGGAGAGGCATGGGTAAAGAATTTGCTGGACATGAG 1021516
Query 214262 CCTGTAGGTCTCCAGGAC 214279
||| ||||| |||||
Sbjct 1021517 GTGGTATGTCTCAAGGAC 1021534
>seq35
Length=1329723
Score = 221 bits (244), Expect = 2e-52
Identities = 569/851 (67%), Gaps = 28/851 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| |||||||||||
Sbjct 994078 CTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 994137
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957
||||||| |||||||||| | || || | | | || ||| | | ||||
Sbjct 994138 CATGAAGTCAAAGGGGTTGGAGGACTTGTAAATCT-TCTCGTTGCCAAGAGCGACGAGCA 994196
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| || || |||| ||||| | ||| |||||| ||||||||| | || |
Sbjct 994197 GACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAGAG 994256
Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTAT-CTGCACGGCTTCCCCCACAAT 48075
||| ||| | ||||| || | ||||| | ||| || ||| ||||| || | ||
Sbjct 994257 -CACAGGGGAGAGCCTCGGTCAAGAACTCTTGCTCGATTCTG-ACGGCATCAGTGATGAT 994314
Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCAT 48129
|| ||| | | ||| || | |||| ||| ||| | | |||||
Sbjct 994315 ----TTCACG-GATAATCTCC---TTGCTGGCGC-GGTTCTTCAGGTGAGAGTGGAGCAG 994365
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||| |||||||| |||||| ||| ||||| || ||||||| ||||||||||| ||
Sbjct 994366 GCAAGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 994425
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|||||||||| || |||| ||||||||||| || | || || | || ||||||
Sbjct 994426 GCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAA 994485
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||| ||||| || || || || || || | || | || |||| || ||||||
Sbjct 994486 GATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTG 994545
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
|||||| | |||||||| |||||||| |||||| || || ||||| |||||
Sbjct 994546 GATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTT 994605
Query 48370 GAAGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428
|||||| | |||| || | ||| ||| || ||||| || ||| | |||
Sbjct 994606 GAAGAGGTAGTTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGG 994664
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| ||||||||| | ||||| |
Sbjct 994665 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 994724
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || | ||| | ||| | ||| ||||| ||||| || || || || ||||
Sbjct 994725 TCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAG 994784
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604
|||||||||| |||| || | ||| | ||||| | | | || || |||
Sbjct 994785 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTC 994843
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | || ||| ||| || | ||||| | ||||||||||| || ||
Sbjct 994844 CAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCC 994903
Query 48665 TTTTTGTACAT 48675
|||||||||||
Sbjct 994904 TTTTTGTACAT 994914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531274615040
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