Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq35 131 1e-25
>seq35
Length=1329723
Score = 131 bits (144), Expect = 1e-25
Identities = 219/317 (69%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| ||||| ||||| | |||| | || | ||||| ||| |||||| ||||||||
Sbjct 838933 TCGGTCTCAGGGTTCTTGCATTTCTTGCAGAGGACAAATTTGTTGATGAAGCCATCAAGA 838874
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
||||||| | ||| | | ||||||| |||||||| ||| | || |||| |||
Sbjct 838873 TGGTCCTGCAGCTTGGCAGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGG 838814
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497
|| | | || || || || |||||| | || |||||||| | || | ||
Sbjct 838813 TCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACATAGGAACCAGGG 838754
Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557
|| |||| | || ||||| || || |||||||| || |||||||| ||||| |||
Sbjct 838753 CGAGCAAGAGACTGGGCGACGCTGGACAAGTTGACGACAACGGTCTTGATACCGTTACCC 838694
Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617
|| ||||| | ||||| ||||||| ||| |||||||||||||| || || |||
Sbjct 838693 TTGCCTTCAATCTTGGTCTGGATGCGCTCCATCTTGTAGCGGTAGAAGGCATCGCTGACA 838634
Query 34618 TTGCGGTTAACGTTCAC 34634
| ||| |||||| ||
Sbjct 838633 TCGCGACGAACGTTGAC 838617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840940872583
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |