Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq35 131 1e-25 >seq35 Length=1329723 Score = 131 bits (144), Expect = 1e-25 Identities = 219/317 (69%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | |||| | || | ||||| ||| |||||| |||||||| Sbjct 838933 TCGGTCTCAGGGTTCTTGCATTTCTTGCAGAGGACAAATTTGTTGATGAAGCCATCAAGA 838874 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | ||| | | ||||||| |||||||| ||| | || |||| ||| Sbjct 838873 TGGTCCTGCAGCTTGGCAGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGG 838814 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || || || |||||| | || |||||||| | || | || Sbjct 838813 TCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACATAGGAACCAGGG 838754 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| | || ||||| || || |||||||| || |||||||| ||||| ||| Sbjct 838753 CGAGCAAGAGACTGGGCGACGCTGGACAAGTTGACGACAACGGTCTTGATACCGTTACCC 838694 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||||| ||||||| ||| |||||||||||||| || || ||| Sbjct 838693 TTGCCTTCAATCTTGGTCTGGATGCGCTCCATCTTGTAGCGGTAGAAGGCATCGCTGACA 838634 Query 34618 TTGCGGTTAACGTTCAC 34634 | ||| |||||| || Sbjct 838633 TCGCGACGAACGTTGAC 838617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840940872583