Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq24 120 4e-22 >seq24 Length=1542676 Score = 120 bits (132), Expect = 4e-22 Identities = 194/274 (71%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTACCTGGCCCCAA 147289 ||||||||| ||||||| ||| |||||| ||| ||| || || || || |||| Sbjct 36692 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCA-TCGACATAGTCTGCGCCAA 36634 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349 |||||| ||||||||||||||| || || |||||||||||| | | ||| | | ||| Sbjct 36633 AGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG-AGC 36575 Query 147350 CCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 ||| | | | ||| |||||| |||| |||| | |||||||||| || ||| | || Sbjct 36574 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACGTCG 36515 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 ||| | | || ||| |||| |||||||||||| ||||| | | || | Sbjct 36514 CTGAGGGCGGTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCG 36455 Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | ||||| | ||||||||| |||||||||| Sbjct 36454 CGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 36421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487044538400