Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq24 120 4e-22
>seq24
Length=1542676
Score = 120 bits (132), Expect = 4e-22
Identities = 194/274 (71%), Gaps = 4/274 (1%)
Strand=Plus/Minus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTACCTGGCCCCAA 147289
||||||||| ||||||| ||| |||||| ||| ||| || || || || ||||
Sbjct 36692 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCA-TCGACATAGTCTGCGCCAA 36634
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
|||||| ||||||||||||||| || || |||||||||||| | | ||| | | |||
Sbjct 36633 AGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG-AGC 36575
Query 147350 CCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408
||| | | | ||| |||||| |||| |||| | |||||||||| || ||| | ||
Sbjct 36574 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACGTCG 36515
Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468
||| | | || ||| |||| |||||||||||| ||||| | | || |
Sbjct 36514 CTGAGGGCGGTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCG 36455
Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
| ||||| | ||||||||| ||||||||||
Sbjct 36454 CGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 36421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487044538400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |