Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq44 98.7 8e-16 >seq44 Length=3047126 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| ||||||| ||||| ||||| ||| | Sbjct 758071 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAG 758130 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| ||||| || || || || | |||||| || || ||||| || | | | Sbjct 758131 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTTGACTTGACGTTG 758190 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | || || | | || ||||| || || || | ||||| |||| ||| || ||| Sbjct 758191 TCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCTTGCCGGTCAAAGTCTTGACA 758250 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 758251 AAGATCTGCATA 758262 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||| ||||||| | |||| |||| || ||||| ||||| Sbjct 758293 GTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCAAGCTGCTTACCA 758352 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| || || || || | |||||| || || ||||||| || Sbjct 758353 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 758412 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || || || || || || | ||||| || ||||| Sbjct 758413 ACGTTGTCAATGGTATCGGATGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 758472 Query 27231 TTCAC 27235 || || Sbjct 758473 TTGAC 758477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933721565672