Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq35 138 4e-27
>seq35
Length=1329723
Score = 138 bits (152), Expect = 4e-27
Identities = 365/544 (67%), Gaps = 19/544 (3%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| || ||||||||||| |||||||| || ||| |||||| | || ||
Sbjct 994890 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 994831
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| || || | ||||| | |||| ||||||||||||| | |||
Sbjct 994830 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCCGA 994775
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
||| || ||| ||||| ||||| ||||||| || ||| | | |||||||
Sbjct 994774 CGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCCGAGGC 994715
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|| | |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 994714 TCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 994655
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631
| | ||| | || ||| || || || || ||||| | | ||| || || ||
Sbjct 994654 GCTCATCGACAC-CTACGTC--AAGGAGCACAGCCAGCGCAACTACCTCTTCAACGC-CA 994599
Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688
| ||||| || ||||| | | ||| || |||||| | ||||| || | ||
Sbjct 994598 TTGAGACCATTCCTTGCATCCGTAAGAAGGCTGACTGGGCCATCAAGTGGATCCAG-GAC 994540
Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747
|| ||| | || | |||| || || || ||||||| ||||| || | || ||
Sbjct 994539 AAGGACTCTTCCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTC 994480
Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807
||||| ||| || ||||||||||||||| | || ||| | || || |||| || |||||
Sbjct 994479 AGCGG-AGCCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGAC 994421
Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||| || ||| ||| |||||||| |||| |||||| || || || ||
Sbjct 994420 CTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCCTGCACACCGACTTTGCTTGCCTGCT 994361
Query 443868 CTAC 443871
| ||
Sbjct 994360 CCAC 994357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588333334077295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |