Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq24 86.0 5e-12
>seq24
Length=1542676
Score = 86.0 bits (94), Expect = 5e-12
Identities = 266/406 (66%), Gaps = 22/406 (5%)
Strand=Plus/Minus
Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118
||||| ||||| | ||||| || || || || ||||||||| ||||| ||
Sbjct 36817 ACGTAGAACTGGGCAAACATG---TGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTT 36761
Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCC------TGATGAGG 30172
|||||||| |||| | ||| || | | ||| | ||| |||| | || || |
Sbjct 36760 GGGTTCCATGCGCTGAGGATCATTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATG 36701
Query 30173 TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 30232
| |||| |||||| || || ||| | || | |||||||| ||
Sbjct 36700 ATCTCGGC------CAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACA 36647
Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292
|| ||||| || || |||| ||||||||| ||||| || || |||||||| || | ||
Sbjct 36646 TAGTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCG 36587
Query 30293 CTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351
| ||| || |||| | |||| | || || | ||| |||||| |||||||||||||
Sbjct 36586 CGGTGGGTGA-GCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTT 36528
Query 30352 TACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCT 30410
|| ||| || ||| | |||| ||| ||||| || |||||| || ||||
Sbjct 36527 GACGCCCACGTCGCTGAGGGCGGTGGACGAGGTGTTGCCCTC-GATGAACCAGAGGAGCT 36469
Query 30411 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
| | | |||||| ||||| | |||||| ||||| |||||
Sbjct 36468 CGGCGATGACGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGG 36423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406309751300052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |