Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq44 91.5 1e-13
>seq44
Length=3047126
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || |||||||| || || || || || ||| || || || |||| ||
Sbjct 758053 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCC 758112
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| || || || || || || ||||||||||| | ||| | | ||| |||||| ||
Sbjct 758113 AGCTGCTTACCAGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TG 758171
Query 39196 ATTTTCTG-TTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
| | | || |||| ||| | | | ||||| |||||||| |||| ||||| | |
Sbjct 758172 AATCTTTGACTTGA-CGTTGTCGATGGTATCAGATGACTCCACTTCCAGTGTGATTGTCT 758230
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || |||| || || |||||||| |||||
Sbjct 758231 TGCCGGTCAAAGTCTTGACAAAGATCTGCAT 758261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544914203603
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |