Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 6e-11 >seq24 Length=1542676 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || ||||| || || |||| ||| ||||| ||||| || || |||||||| || | || Sbjct 36646 TAGTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCG 36587 Query 27559 CTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617 | ||| || |||| | |||| | || || | ||| |||||| ||||||||||||| Sbjct 36586 CGGTGGGTGA-GCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTT 36528 Query 27618 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCT 27676 || ||| ||| ||| | |||| ||| ||||| || |||||| || |||| Sbjct 36527 GACGCCCACGTCGCTGAGGGCGGTGGACGAGGTGTTGCCCTC-GATGAACCAGAGGAGCT 36469 Query 27677 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | | |||||| ||||| | |||||| ||||| ||||| Sbjct 36468 CGGCGATGACGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGG 36423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506610058661