Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq24 82.4 6e-11
>seq24
Length=1542676
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558
|| ||||| || || |||| ||| ||||| ||||| || || |||||||| || | ||
Sbjct 36646 TAGTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCG 36587
Query 27559 CTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617
| ||| || |||| | |||| | || || | ||| |||||| |||||||||||||
Sbjct 36586 CGGTGGGTGA-GCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTT 36528
Query 27618 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCT 27676
|| ||| ||| ||| | |||| ||| ||||| || |||||| || ||||
Sbjct 36527 GACGCCCACGTCGCTGAGGGCGGTGGACGAGGTGTTGCCCTC-GATGAACCAGAGGAGCT 36469
Query 27677 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
| | | |||||| ||||| | |||||| ||||| |||||
Sbjct 36468 CGGCGATGACGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGG 36423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506610058661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |