Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 113 1e-19 >seq7 Length=2824016 Score = 113 bits (124), Expect = 1e-19 Identities = 271/405 (67%), Gaps = 4/405 (1%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| | |||| | ||||||||||| | || |||||| ||| Sbjct 1203033 CCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCA 1203092 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355 || ||| ||||||||||| || || | | || || | | | || | || || Sbjct 1203093 TCTCTCGTGACGAGGGTCTGCA-CACCGACTTTGCTTGCCTGCTCCACTCTCACCTGAAG 1203151 Query 230356 AACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 ||| || | || |||| || ||||||| || || || || || ||| | Sbjct 1203152 AACCGCGCCAGCAAG-GAGATTATCCGTGAAATCATCACTGATGCCGTCAGAATCGAGCA 1203210 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474 || ||| | || ||| | || ||| || | ||||||||||| || ||| Sbjct 1203211 AGAATTCTTGACCGAGGCTCTCCCCTGTGCTCTGCTGGGCATGAACGCCACCCTGATGAA 1203270 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| || || || ||||| || | | || || ||||| ||||||| | || Sbjct 1203271 GCAGTACATTGAGTTTGTTGCCGATCGTCTGCTCGTCGCTCTTGGCAACGAGAAGATTTA 1203330 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 ||| || |||||||||| || |||||| ||| || || || ||||||||||| Sbjct 1203331 CAAGTCCTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTT 1203390 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 |||||| ||||||||| | || || || | | | ||||| ||||| Sbjct 1203391 CTTCGAGAAGCGTGTCGGCGAGTACCAAAAGGCCGGTGTCATGAA 1203435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823688272490