Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq7 150 2e-31
>seq7
Length=2824016
Score = 150 bits (166), Expect = 2e-31
Identities = 560/868 (65%), Gaps = 31/868 (4%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| |||| || || || ||||| ||||| || ||||| | || || || ||||
Sbjct 1203419 TTTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCT 1203360
Query 16734 CCATGAAATCAAAAGGATT--AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||| ||||| || || || | || |||| || | | | || || || |||
Sbjct 1203359 CCATGAAGTCAAAGGGGTTGGAGGACTTGTAAATCTTCTCG--TTGCCAAGAGCGACGAG 1203302
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
| | ||| || ||||| || || || || ||| | | |||||| || | ||
Sbjct 1203301 CAGACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAG 1203242
Query 16852 ACGTACCGGA-AGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910
| | || || ||||| || ||||| ||| |||||| || || || || | || |
Sbjct 1203241 A-GCACAGGGGAGAGCCTCGGTCAAGAATTCTTGCTCGATTCTGACGGCATCAGTGATGA 1203183
Query 16911 T---ACTAGCAA-CTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACAT 16966
| || || ||| || || | |||| || || || | ||| ||
Sbjct 1203182 TTTCACGGATAATCTCCTTGCTGGCGCGGTTC----TTCAGGTGAGAGTGGAGCAGGCAA 1203127
Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026
|| || ||| || | |||||||| | ||| || ||||| || || |||| ||
Sbjct 1203126 GCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCA 1203067
Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086
||||| |||| ||||| | ||| || || | ||| || | || ||||| |||
Sbjct 1203066 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 1203007
Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATC 17146
|||||||||| ||||| || | | || | || | | | ||| |||| | |||
Sbjct 1203006 CCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTGGATC 1202947
Query 17147 CATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA- 17205
|| || |||| || || || | |||||| || || || ||||| || ||
Sbjct 1202946 CACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTGAAG 1202887
Query 17206 ---TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262
|| || | || |||| | || | | || || |||||||| ||| ||| |
Sbjct 1202886 AGGTAGTTGCGCTGG---CTGT-GCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGT 1202831
Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322
|||||||| ||||||||||| ||||| || ||||| |||||||| || || | ||
Sbjct 1202830 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGAT 1202771
Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGC 17382
||||| || || ||| || || | || || ||||| || ||||||||| || ||
Sbjct 1202770 CTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGC 1202711
Query 17383 GAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------ 17436
|| || ||||| || || ||||| || || ||||| | || |||
Sbjct 1202710 AAAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG---GCGGTTGTT 1202654
Query 17437 CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGC 17496
|||||| | | ||| ||||| | ||| | ||||||| |||||| || |||| | ||
Sbjct 1202653 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGC 1202594
Query 17497 CTTTTTATACATATTCCAAATATCATTG 17524
|||||| ||||| | ||| || | ||||
Sbjct 1202593 CTTTTTGTACATTTGCCAGATCTAATTG 1202566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545451205640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |