Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7 118 1e-21 >seq7 Length=2824016 Score = 118 bits (130), Expect = 1e-21 Identities = 185/264 (70%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || || ||||||||||||||||| | || Sbjct 1202829 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 1202770 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || || || || |||||||||| || || || ||||| |||||| Sbjct 1202769 TGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCA 1202710 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAATATGCCAA 16678 || || ||||| ||||| ||||| || || |||||| | | | | | ||| Sbjct 1202709 AAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 1202650 Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738 || | | ||| ||||| | ||| | ||||| | ||||| ||| |||| | |||||| Sbjct 1202649 TCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTT 1202590 Query 16739 TTATACATTTTCCAAATATCATTG 16762 || ||||||| ||| || | |||| Sbjct 1202589 TTGTACATTTGCCAGATCTAATTG 1202566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414252968360