Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03- 01] 23 sequences; 37,316,984 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3 159 4e-34 >seq3 Length=5619901 Score = 159 bits (176), Expect = 4e-34 Identities = 276/399 (69%), Gaps = 4/399 (1%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||| ||||||||||| |||||| | |||| ||| Sbjct 1519701 ACGTAGAACTGGGCAAACATGTGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTTGGG 1519760 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| ||| |||||| | || | | | |||| | | | || || | Sbjct 1519761 TTCCATGCGCTGAGGATCATTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATGATC 1519820 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || |||||||| ||||||| || ||| ||||| | | || || || | || Sbjct 1519821 TCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACATAGTCTGCG 1519880 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 || ||||||| ||||||||| ||||||||||| |||||||| ||| || | ||| Sbjct 1519881 CCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG 1519940 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167 |||||| | | | ||||||| || ||||| |||||| ||||||||||||||||||| | Sbjct 1519941 AGCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACG 1520000 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| ||| | | ||| ||| ||| |||||||||||| ||||| ||| || Sbjct 1520001 TCGCTGAGGG--CGGCGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGA 1520058 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | | |||||| | ||||||||| |||||||||| Sbjct 1520059 CGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 1520097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076630352920