Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3 159 4e-34
>seq3
Length=5619901
Score = 159 bits (176), Expect = 4e-34
Identities = 276/399 (69%), Gaps = 4/399 (1%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | ||| ||||||||||| |||||| | |||| |||
Sbjct 1519701 ACGTAGAACTGGGCAAACATGTGACAGGGCGGCAGAGCCATGCTCTTAAAGTCCTTTGGG 1519760
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989
||||| ||| |||||| | || | | | |||| | | | || || |
Sbjct 1519761 TTCCATGCGCTGAGGATCATTCTGCGGTCGTAGGGGCTGTTTCGCAGCTTGTGGATGATC 1519820
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
|| |||||||| ||||||| || ||| ||||| | | || || || | ||
Sbjct 1519821 TCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCTGTTTGAGCATCGACATAGTCTGCG 1519880
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109
|| ||||||| ||||||||| ||||||||||| |||||||| ||| || | |||
Sbjct 1519881 CCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGGGTG 1519940
Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167
|||||| | | | ||||||| || ||||| |||||| ||||||||||||||||||| |
Sbjct 1519941 AGCCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCCACG 1520000
Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227
|||| ||| | | ||| ||| ||| |||||||||||| ||||| ||| ||
Sbjct 1520001 TCGCTGAGGG--CGGCGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGA 1520058
Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| | | |||||| | ||||||||| ||||||||||
Sbjct 1520059 CGGCGCGGAGGAAGACTCGCTTGGTGGTGAGCAGGGGGA 1520097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076630352920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |