Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F001599035.1_202016-03-
01] 23 sequences; 37,316,984 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7 167 3e-36
>seq7
Length=2824016
Score = 167 bits (184), Expect = 3e-36
Identities = 374/558 (67%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| || || ||| ||||||||||||||| | | || | ||||| || || || ||
Sbjct 1203129 CAAGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGG 1203070
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || | ||| || ||||| || ||||| || || | |||| ||||||
Sbjct 1203069 CCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAG 1203010
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGT 33758
|| || || || ||||||||||||| ||| | || || || | | |||| ||
Sbjct 1203009 ATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGAAGAGTCCTTGTCCTGG 1202950
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||||| ||||| || |||||||| | ||||| || || || ||||| ||
Sbjct 1202949 ATCCACTTGATGGCCCAGTCAGCCTTCTTACGGATGCAAGGAATGGTCTCAATGGCGTTG 1202890
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
||||| ||||| | | || || || || || ||||| | || || |
Sbjct 1202889 AAGAGGTAGTTGCGCTGGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGGGAGTAGGTC 1202830
Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938
|| || || ||||| || || ||||| || |||||||| |||| |||||||| |||
Sbjct 1202829 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 1202770
Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998
|| || || | || || || | | || || || || || || || ||| |||
Sbjct 1202769 TGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCA 1202710
Query 33999 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCA 34054
|| || ||||| | || || || || || ||||| | || | | | || |||||
Sbjct 1202709 AAGAAAGCCAAGATGTGAGAGATGAAGTACTTCTCGTCATCGT-TCAGGCGGTTGTTCCA 1202651
Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114
|| | | ||| || || | ||| | ||||| | ||||| || || ||||| |||||
Sbjct 1202650 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTT 1202591
Query 34115 TTTATACATATTCCAGAT 34132
||| ||||| | ||||||
Sbjct 1202590 TTTGTACATTTGCCAGAT 1202573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817418927440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |